| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yihM [C]
Identifier: 222523710
GI number: 222523710
Start: 489614
End: 490609
Strand: Direct
Name: yihM [C]
Synonym: Chy400_0416
Alternate gene names: 222523710
Gene position: 489614-490609 (Clockwise)
Preceding gene: 222523709
Following gene: 222523711
Centisome position: 9.29
GC content: 57.93
Gene sequence:
>996_bases GTGTTGATCGGTCTTTCCGCTTTGAGTTTTAGCTATCGTTGTGGTTTGATCGGGCGCGGCACGCCCCGTGCGGTTAGCCA TCCGCTCGATATTGAGGGTGTGATGGCCCTGGCCAGCCGTGCCGGTCTGCAGAGCGTTGAATTTCCTCTCAGTCTGCTTC CCGATCTGTCGCCAGGTCGACTCAGCGCTCTGCGCGAACGGCTCACGCTATGCGGTCTGACCCCGGTCGCCGATAGCGAT ATTGTTGATGTTGATACGCTGCGTGCCCATATTCCGGCGGCAGCCATGATCGGCGCTCACGTCTTGCGCGTGCTGATCAG CCCGGTGCTGGAAGGGTACCGACGACCCTTTACCACCGACTGGCCTGCCCATCTGGCCGATGTGACAGATCGGTTACGGG CAGTTATCGATCTGGCTGCCGAACACAATATTATATTGGCCGTTGAAAATCACCAGGACGCGACCAGCGCCGATCTGGCC GCTATATGCGCAGCGGTAGATAGCCCGCACATTGGGGTCTGCTTTGATGCTGTGAATTGTCTGGTAGTGGGTGAAACGCC GTATGCAGCCCTTGAACGCCTGGGACCGCTGATCCGCAATGTCCATCTCGCCGACTACGAGACCTACCCGACGACGCAGG GCTGGCGATTGGTACGCTGCGCACTGGGTGAAGGTGATCTCGATATTCGTCGTCTCTTTCATTTAATCGAGCACTATGCC CCTGATGTTGCCTGCCAGATCGAACTGGTCAGCCATAGCGCCCGTCATGTGCGCATTCTCGACGATGACTGGTGGCAGGG GTATCCACCGTGCGATGTGCGAGAAGTCTTGCCGGTGTTACGACTCTTCGCGCAGACAATGCGCCTGCGCGATGACGACT GGCGTACTCCGTGGGAGCGTGGTGCCGGTGAAGAGCAGATCAGTCTCTACGAAGATCAGCAGTATGCCACCTCGATTGCG TATCTGCGTACAATAGGCATTCTTCCTCGCCTGTGA
Upstream 100 bases:
>100_bases AAGCACTGCCCGACAGACTGCCGAGAATCAGACTGCGTAACTCACGGTCAGCAACACATGTGGTATGATAGAAGACCTTG AAGTGAGATGAGGTTTGGCC
Downstream 100 bases:
>100_bases GAAAAACAGTACTAAATTCCTGTCTCACCCCCCATTTTGACCGACATACAGGCATGCTACAATCAATGACAACTGGTTGA GAAGCTGTTCAAAGGGTGCT
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugare Isomerase
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLIGLSALSFSYRCGLIGRGTPRAVSHPLDIEGVMALASRAGLQSVEFPLSLLPDLSPGRLSALRERLTLCGLTPVADSD IVDVDTLRAHIPAAAMIGAHVLRVLISPVLEGYRRPFTTDWPAHLADVTDRLRAVIDLAAEHNIILAVENHQDATSADLA AICAAVDSPHIGVCFDAVNCLVVGETPYAALERLGPLIRNVHLADYETYPTTQGWRLVRCALGEGDLDIRRLFHLIEHYA PDVACQIELVSHSARHVRILDDDWWQGYPPCDVREVLPVLRLFAQTMRLRDDDWRTPWERGAGEEQISLYEDQQYATSIA YLRTIGILPRL
Sequences:
>Translated_331_residues MLIGLSALSFSYRCGLIGRGTPRAVSHPLDIEGVMALASRAGLQSVEFPLSLLPDLSPGRLSALRERLTLCGLTPVADSD IVDVDTLRAHIPAAAMIGAHVLRVLISPVLEGYRRPFTTDWPAHLADVTDRLRAVIDLAAEHNIILAVENHQDATSADLA AICAAVDSPHIGVCFDAVNCLVVGETPYAALERLGPLIRNVHLADYETYPTTQGWRLVRCALGEGDLDIRRLFHLIEHYA PDVACQIELVSHSARHVRILDDDWWQGYPPCDVREVLPVLRLFAQTMRLRDDDWRTPWERGAGEEQISLYEDQQYATSIA YLRTIGILPRL >Mature_331_residues MLIGLSALSFSYRCGLIGRGTPRAVSHPLDIEGVMALASRAGLQSVEFPLSLLPDLSPGRLSALRERLTLCGLTPVADSD IVDVDTLRAHIPAAAMIGAHVLRVLISPVLEGYRRPFTTDWPAHLADVTDRLRAVIDLAAEHNIILAVENHQDATSADLA AICAAVDSPHIGVCFDAVNCLVVGETPYAALERLGPLIRNVHLADYETYPTTQGWRLVRCALGEGDLDIRRLFHLIEHYA PDVACQIELVSHSARHVRILDDDWWQGYPPCDVREVLPVLRLFAQTMRLRDDDWRTPWERGAGEEQISLYEDQQYATSIA YLRTIGILPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36659; Mature: 36659
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGLSALSFSYRCGLIGRGTPRAVSHPLDIEGVMALASRAGLQSVEFPLSLLPDLSPGR CEEECCHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHCCCHHHCCCCCCHH LSALRERLTLCGLTPVADSDIVDVDTLRAHIPAAAMIGAHVLRVLISPVLEGYRRPFTTD HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC WPAHLADVTDRLRAVIDLAAEHNIILAVENHQDATSADLAAICAAVDSPHIGVCFDAVNC CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECEEE LVVGETPYAALERLGPLIRNVHLADYETYPTTQGWRLVRCALGEGDLDIRRLFHLIEHYA EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC PDVACQIELVSHSARHVRILDDDWWQGYPPCDVREVLPVLRLFAQTMRLRDDDWRTPWER CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHC GAGEEQISLYEDQQYATSIAYLRTIGILPRL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLIGLSALSFSYRCGLIGRGTPRAVSHPLDIEGVMALASRAGLQSVEFPLSLLPDLSPGR CEEECCHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHCCCHHHCCCCCCHH LSALRERLTLCGLTPVADSDIVDVDTLRAHIPAAAMIGAHVLRVLISPVLEGYRRPFTTD HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC WPAHLADVTDRLRAVIDLAAEHNIILAVENHQDATSADLAAICAAVDSPHIGVCFDAVNC CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECEEE LVVGETPYAALERLGPLIRNVHLADYETYPTTQGWRLVRCALGEGDLDIRRLFHLIEHYA EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC PDVACQIELVSHSARHVRILDDDWWQGYPPCDVREVLPVLRLFAQTMRLRDDDWRTPWER CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHC GAGEEQISLYEDQQYATSIAYLRTIGILPRL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA