| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523639
Identifier: 222523639
GI number: 222523639
Start: 409822
End: 410442
Strand: Direct
Name: 222523639
Synonym: Chy400_0345
Alternate gene names: NA
Gene position: 409822-410442 (Clockwise)
Preceding gene: 222523634
Following gene: 222523640
Centisome position: 7.78
GC content: 40.1
Gene sequence:
>621_bases ATGGAAAGTGTTACAGACAAAATTCGTTCATTAGCATCAAAGTATGCTCAAGAGCTACAACACAAGATCGAAACTCGCAC CAAAGAATTAGAAAGCGACGATCAATCACACTATCTGATATATAAAGTTCTAGGAATACAAGATGATGAAGGAAGATTAA TTGATCTGTATCAAAACAAAGGACGATTTCTTTACAAATATGCCGGCGCATTTCTGGAAGAAGCTACCTTTCTCTGCTTC AAAGAACGCTTCCCTCATGCGAGACGTGCGCAAGTAGAGAACACATCTGGTCAGCGTCCACGGCAATTTCACATAGATTG CCTGATAGATAGGGAGGCAATAGAGATCAAATGGCGTGATGCTACCACTGATGGCGATCATATTATCAAAGAACATGCAC GGATAAAGGTTATTAAAGATCACGGTTTTTATCCAGTTAGAGTTATGTTCTTCTACCCTAATCGAGAGCAGGCCAAAAGG ATACAAGAGACCATAAAAACCGTCTATCAGGGTATCGGAGGAGCATGTTATACTGGAGATGATGCGTGGGAATATGTAAG AACCAGAACAGGCATTGATTTAAAGGTGATTCTGGTCAATATTGCAAAAGATTTGCAATGA
Upstream 100 bases:
>100_bases CAAAGGCCAGTGCAGACACCCATACTGCCTGGCCGATGCTCATTTGCTCTATAATAATGCGAATGCGGACCTCACAGACA CAATCTAAGGGTACAGATAT
Downstream 100 bases:
>100_bases AAGGAGTGGATATGACAGTGCTTTGTGGAGATTGTAGAATTGTTTTACAAAGTATAAATGACAGCAGCATTGATCTTGTG TATATGGATCCGCCATTTTT
Product: restriction endonuclease R XbaI
Products: NA
Alternate protein names: Type II Restriction Endonuclease Truncation; Restriction Endonuclease
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MESVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVLGIQDDEGRLIDLYQNKGRFLYKYAGAFLEEATFLCF KERFPHARRAQVENTSGQRPRQFHIDCLIDREAIEIKWRDATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKR IQETIKTVYQGIGGACYTGDDAWEYVRTRTGIDLKVILVNIAKDLQ
Sequences:
>Translated_206_residues MESVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVLGIQDDEGRLIDLYQNKGRFLYKYAGAFLEEATFLCF KERFPHARRAQVENTSGQRPRQFHIDCLIDREAIEIKWRDATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKR IQETIKTVYQGIGGACYTGDDAWEYVRTRTGIDLKVILVNIAKDLQ >Mature_206_residues MESVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVLGIQDDEGRLIDLYQNKGRFLYKYAGAFLEEATFLCF KERFPHARRAQVENTSGQRPRQFHIDCLIDREAIEIKWRDATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKR IQETIKTVYQGIGGACYTGDDAWEYVRTRTGIDLKVILVNIAKDLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24179; Mature: 24179
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVLGIQDDEGRLIDLYQNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEECC GRFLYKYAGAFLEEATFLCFKERFPHARRAQVENTSGQRPRQFHIDCLIDREAIEIKWRD CCEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEECCEEEEEEEC ATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKRIQETIKTVYQGIGGACYTGD CCCCHHHHHHHCCEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCC DAWEYVRTRTGIDLKVILVNIAKDLQ HHHHHHHHCCCCEEEEEEEEHHHHCC >Mature Secondary Structure MESVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVLGIQDDEGRLIDLYQNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEECC GRFLYKYAGAFLEEATFLCFKERFPHARRAQVENTSGQRPRQFHIDCLIDREAIEIKWRD CCEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEECCEEEEEEEC ATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKRIQETIKTVYQGIGGACYTGD CCCCHHHHHHHCCEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCC DAWEYVRTRTGIDLKVILVNIAKDLQ HHHHHHHHCCCCEEEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA