| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523631
Identifier: 222523631
GI number: 222523631
Start: 402996
End: 403325
Strand: Direct
Name: 222523631
Synonym: Chy400_0337
Alternate gene names: NA
Gene position: 402996-403325 (Clockwise)
Preceding gene: 222523630
Following gene: 222523632
Centisome position: 7.65
GC content: 51.21
Gene sequence:
>330_bases ATGTCGAAACCCCAAATGAACCCATATGTGCGCCACATCTTTATCTGTACTGGACGCTATTGTGATCCAGAAGGCACGGC TCCACAACTATATGCACAATTGGCGCAACTATTAGGGCCTTTGGGGAATTATCACAATCCGTGCCGGGTAAAGCGGGGCA CGACACCCTGTTTGGGAGTCTGCTCCGCTGGCCCCATCGTTGTGATCTACCCGGAAGGCATTTGGTACCATCACGTTGAT AAAACCGTTCTCGAACGCATCGTGCGTGAGCATCTGGTGCAAAACAGACCGGTAGTTGAGCATATCTTCCACCAGTTGCA TGAGCAGTGA
Upstream 100 bases:
>100_bases ACATCTGATCCTGGCAGATTTGATCAAGATTTTCCACCCAGAACTCTTGCCGGATCACGAACTCTTCTTCTATCAGCAAC TGACACCGTAGAGGTGAACG
Downstream 100 bases:
>100_bases GTAAGAATAGAGAGATGAGCATGACAAAAACACTCTCAGCAGCGATACAATCTACACGATGGCCACGGCCAGGCTTGCAA CCGTTGGTTCTACTGGCAAT
Product: ferredoxin-like protein
Products: NA
Alternate protein names: Ferredoxin Protein; Ferredoxin; Cob(I)Alamin Adenosyltransferase; Ferredoxin 2Fe-2S
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSKPQMNPYVRHIFICTGRYCDPEGTAPQLYAQLAQLLGPLGNYHNPCRVKRGTTPCLGVCSAGPIVVIYPEGIWYHHVD KTVLERIVREHLVQNRPVVEHIFHQLHEQ
Sequences:
>Translated_109_residues MSKPQMNPYVRHIFICTGRYCDPEGTAPQLYAQLAQLLGPLGNYHNPCRVKRGTTPCLGVCSAGPIVVIYPEGIWYHHVD KTVLERIVREHLVQNRPVVEHIFHQLHEQ >Mature_108_residues SKPQMNPYVRHIFICTGRYCDPEGTAPQLYAQLAQLLGPLGNYHNPCRVKRGTTPCLGVCSAGPIVVIYPEGIWYHHVDK TVLERIVREHLVQNRPVVEHIFHQLHEQ
Specific function: Unknown
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12482; Mature: 12350
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPQMNPYVRHIFICTGRYCDPEGTAPQLYAQLAQLLGPLGNYHNPCRVKRGTTPCLGV CCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE CSAGPIVVIYPEGIWYHHVDKTVLERIVREHLVQNRPVVEHIFHQLHEQ CCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure SKPQMNPYVRHIFICTGRYCDPEGTAPQLYAQLAQLLGPLGNYHNPCRVKRGTTPCLGV CCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE CSAGPIVVIYPEGIWYHHVDKTVLERIVREHLVQNRPVVEHIFHQLHEQ CCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA