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The map label for this gene is yfkA [H]

Identifier: 222151851

GI number: 222151851

Start: 1741604

End: 1742731

Strand: Direct

Name: yfkA [H]

Synonym: MCCL_1608

Alternate gene names: 222151851

Gene position: 1741604-1742731 (Clockwise)

Preceding gene: 222151843

Following gene: 222151854

Centisome position: 82.84

GC content: 38.03

Gene sequence:

>1128_bases
ATGATCGCTTTAAAAGATAAAATTTCAATTCACAACGATCCATGGGAAGCATACAATGAAGTGGAGAAATTTGGTGAGAC
GAAGTTATCTAATATAGAATTTACGACGACAACACTATGTAATATGCGTTGTGCACATTGTGCTGTCGGTTATACGTTGC
AACTCAAGGATCCAGATACAATTGATATGACGACGATACTTAAACGTTTAGATGAAGTAGAACACTTATCAACATTAAGT
ATCACAGGCGGAGAACCGATGTTCTCTAAAAAATCGATAAAAAAAACAGTAACGCCTATACTTGAATATGCTAAGTCACG
TGGTATCTATACACAGATGAACTCAAACTTAACGATAAACTATGATCGCTATGAACCATTAATCGATCTAATAGATGTGA
TGCATATTTCTCATAACTGGGGAACGATCGATGAATTTGCGGAAGTTGGCTTTCACGTGATGGATAAGAAGCCACCAATT
AAAGCACGCTATAAATTATATGAACAAATTATAGAGAACGCACGACGCTTATCTGAGGCAGGCATGTTTGTCTCAGCAGA
AACGATGCTCAATAAAAGTACGCTACCTTATCTAGAGAAGATTCATAAGGAAATCGTCAACGACATGAAATGTGCACGTC
ACGAAGTACATCCGATGTACCCATCAGACTTTGCAAGTGATTTAAATGTGTTAACAATAGAAGAAACGAAAACTGCAATC
AGACAATTACTATCATTTAGAGATGAGGATACATGGATGTTATTTGGTACGTTACCAATACTGCCATGTTCTATGAATGC
AGATGACTTATCATTTTTAGATGACGTCCACAGTGCAAAGAACGTTACAGTCCGTAATGATCCAGATGGACGTTCACGAC
TGAATGTTAACGTGTTTACCGGAGATGTCATCGTGACAGACTTTGGCGATGAAACAGGCACAATCGAGAATATTATTGAC
ACACCACTCCAGGATGTATACGATAAGTGGAAACAGAGTGCTCTCAATCAGACGATTAACTGTCACTGCCCGAAAGTGAA
ATGTCTCGGTCCGAATCTACTTGTGAAGAACATGTATTATCCAGATATCGACTTTAAAGTAAACGAAAAACGAATGCACG
AACAATAG

Upstream 100 bases:

>100_bases
CATTATGTAACAGATTTCTTAAACTTTCAATGTATTTATTGACGACACTTCTTACACGTTCATAATAGTAATCGGACAAT
AAATGGAAAGAAGGCAAATT

Downstream 100 bases:

>100_bases
AAATTAAAAAATCACGTGAAGCAGTATGCTTTACGTGATTTTTTGTTGAGCTTGTTTTGATGAGTGTCCGTTTGACGGAC
ACTCACTCCATACTATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MIALKDKISIHNDPWEAYNEVEKFGETKLSNIEFTTTTLCNMRCAHCAVGYTLQLKDPDTIDMTTILKRLDEVEHLSTLS
ITGGEPMFSKKSIKKTVTPILEYAKSRGIYTQMNSNLTINYDRYEPLIDLIDVMHISHNWGTIDEFAEVGFHVMDKKPPI
KARYKLYEQIIENARRLSEAGMFVSAETMLNKSTLPYLEKIHKEIVNDMKCARHEVHPMYPSDFASDLNVLTIEETKTAI
RQLLSFRDEDTWMLFGTLPILPCSMNADDLSFLDDVHSAKNVTVRNDPDGRSRLNVNVFTGDVIVTDFGDETGTIENIID
TPLQDVYDKWKQSALNQTINCHCPKVKCLGPNLLVKNMYYPDIDFKVNEKRMHEQ

Sequences:

>Translated_375_residues
MIALKDKISIHNDPWEAYNEVEKFGETKLSNIEFTTTTLCNMRCAHCAVGYTLQLKDPDTIDMTTILKRLDEVEHLSTLS
ITGGEPMFSKKSIKKTVTPILEYAKSRGIYTQMNSNLTINYDRYEPLIDLIDVMHISHNWGTIDEFAEVGFHVMDKKPPI
KARYKLYEQIIENARRLSEAGMFVSAETMLNKSTLPYLEKIHKEIVNDMKCARHEVHPMYPSDFASDLNVLTIEETKTAI
RQLLSFRDEDTWMLFGTLPILPCSMNADDLSFLDDVHSAKNVTVRNDPDGRSRLNVNVFTGDVIVTDFGDETGTIENIID
TPLQDVYDKWKQSALNQTINCHCPKVKCLGPNLLVKNMYYPDIDFKVNEKRMHEQ
>Mature_375_residues
MIALKDKISIHNDPWEAYNEVEKFGETKLSNIEFTTTTLCNMRCAHCAVGYTLQLKDPDTIDMTTILKRLDEVEHLSTLS
ITGGEPMFSKKSIKKTVTPILEYAKSRGIYTQMNSNLTINYDRYEPLIDLIDVMHISHNWGTIDEFAEVGFHVMDKKPPI
KARYKLYEQIIENARRLSEAGMFVSAETMLNKSTLPYLEKIHKEIVNDMKCARHEVHPMYPSDFASDLNVLTIEETKTAI
RQLLSFRDEDTWMLFGTLPILPCSMNADDLSFLDDVHSAKNVTVRNDPDGRSRLNVNVFTGDVIVTDFGDETGTIENIID
TPLQDVYDKWKQSALNQTINCHCPKVKCLGPNLLVKNMYYPDIDFKVNEKRMHEQ

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197
- InterPro:   IPR014866 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08756 YfkB [H]

EC number: NA

Molecular weight: Translated: 43030; Mature: 43030

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALKDKISIHNDPWEAYNEVEKFGETKLSNIEFTTTTLCNMRCAHCAVGYTLQLKDPDT
CCEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEECCCCC
IDMTTILKRLDEVEHLSTLSITGGEPMFSKKSIKKTVTPILEYAKSRGIYTQMNSNLTIN
CCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
YDRYEPLIDLIDVMHISHNWGTIDEFAEVGFHVMDKKPPIKARYKLYEQIIENARRLSEA
EHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
GMFVSAETMLNKSTLPYLEKIHKEIVNDMKCARHEVHPMYPSDFASDLNVLTIEETKTAI
CCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHHHHH
RQLLSFRDEDTWMLFGTLPILPCSMNADDLSFLDDVHSAKNVTVRNDPDGRSRLNVNVFT
HHHHHCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEE
GDVIVTDFGDETGTIENIIDTPLQDVYDKWKQSALNQTINCHCPKVKCLGPNLLVKNMYY
CCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCC
PDIDFKVNEKRMHEQ
CCCCEEECHHHCCCC
>Mature Secondary Structure
MIALKDKISIHNDPWEAYNEVEKFGETKLSNIEFTTTTLCNMRCAHCAVGYTLQLKDPDT
CCEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEECCCCC
IDMTTILKRLDEVEHLSTLSITGGEPMFSKKSIKKTVTPILEYAKSRGIYTQMNSNLTIN
CCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
YDRYEPLIDLIDVMHISHNWGTIDEFAEVGFHVMDKKPPIKARYKLYEQIIENARRLSEA
EHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
GMFVSAETMLNKSTLPYLEKIHKEIVNDMKCARHEVHPMYPSDFASDLNVLTIEETKTAI
CCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHHHHH
RQLLSFRDEDTWMLFGTLPILPCSMNADDLSFLDDVHSAKNVTVRNDPDGRSRLNVNVFT
HHHHHCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEE
GDVIVTDFGDETGTIENIIDTPLQDVYDKWKQSALNQTINCHCPKVKCLGPNLLVKNMYY
CCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCC
PDIDFKVNEKRMHEQ
CCCCEEECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]