Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222151832

Identifier: 222151832

GI number: 222151832

Start: 1715676

End: 1716923

Strand: Direct

Name: 222151832

Synonym: MCCL_1589

Alternate gene names: NA

Gene position: 1715676-1716923 (Clockwise)

Preceding gene: 222151830

Following gene: 222151833

Centisome position: 81.61

GC content: 32.69

Gene sequence:

>1248_bases
ATGAATACGTTAGGAAGTAGAATCAGAAATTTAAGAAAAGAAAAGAAATTGACATTAGAAGCTCTTGCCGGAGATTATAT
GACAAAGGGCATGTTAAGTCTTATCGAAAACAACAAAAACAACCCATCAATGGAAAGTTTAGAATATATTGCTGAACGTT
TAGGTACATCTGTCAGTGCTTTACTGGAGGATGGCAGCGAGGTTACAACAAACAATATTTATAATGAAATTAAACAGATA
TTAAAAGTACCGAATATTTCTTATCAGAAAGAAATTGATGGAATCCTATCCCCTATTATTAATGAGATACAGCATAACAG
AAAGGGCGCCTTCATATTTAAGCATTATGCATTTACAAAAGCACGCATTAATGATGTTGATAATGCTGTGAAATATATGA
ATAAAGCAAAATCAATCTATGCTGATAATGATGATATAAATGAATTAATCGAGGTTGAAAGAGATTACGCAAGCATATAT
TATCTTGTAAGGGATTACGATAAAGCATTGCAGCATGCGATTACAACTTATGAAACTTATAAAGATGACCTATCTGTTAC
AAATCCAAATATCATCCCTAACTTACTCGTATCAATCGGAATGTTCTGCTATCAGAACTACGATATTGATGACTGTATTA
AATACTTTAAGCTTGCTGAAGAAAAGTGTATAGAGAACAAGACTTACAAACATCTGACACCAATATATAAATCATTGTGC
ATCATGTATATATTGAATCAGGATGAAACACATTATAGAGTCACATATAAAAAATTTGATAATATAAAGCAGTTAAATCC
AGATGATTTCCAGACAAATTTCGATATATTTACAACAGATATCATCTATTACTTCTTTAACGAGGAATACCATAAGCTGT
TACACCTACTGGATCAAAGAGATACACTGTTAAAGCACAATCAGTACCAGCAGCAAGTAAATGATAACTTCGAGGCCTTC
TGGAGCTTATATAAAGCAATTGCACTTTATAACTTACAACAATATGACAGCGCAGTTTCCATTTTGAATAGTGATGACGC
TGATACAGAATTTACGGCACTTGCAGACGTAAGTATACATGCGCAGAAATACACTTATCTTGCTTTAAATGAGGAGCGAT
TAGGCAATCATAAAAGCGCATGTGATTACATTATTAAGGCGATGGGTATTATTAAATCAATCCCATCGAATCATTTCACT
CAAATAACCGAGCAGACATATGAACGTATCATAAATAAAAGCCTCTAA

Upstream 100 bases:

>100_bases
TAAATCTCCCCTTTGTTTAATTTAATTAAACTTATTATATAAAAAGAAAATTTGAAATGCAAACAAAAGTTTAATACAAT
TAAACATATGGAGGGAAAGA

Downstream 100 bases:

>100_bases
ACGCAATGTTTAGAGGCTTTAGTATACCACCGGTCGGGGTCGAACCGACACTCCGTGAGGAACCGGATTTTGAGTCCGGC
GCGTCTGCCAATTCCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MNTLGSRIRNLRKEKKLTLEALAGDYMTKGMLSLIENNKNNPSMESLEYIAERLGTSVSALLEDGSEVTTNNIYNEIKQI
LKVPNISYQKEIDGILSPIINEIQHNRKGAFIFKHYAFTKARINDVDNAVKYMNKAKSIYADNDDINELIEVERDYASIY
YLVRDYDKALQHAITTYETYKDDLSVTNPNIIPNLLVSIGMFCYQNYDIDDCIKYFKLAEEKCIENKTYKHLTPIYKSLC
IMYILNQDETHYRVTYKKFDNIKQLNPDDFQTNFDIFTTDIIYYFFNEEYHKLLHLLDQRDTLLKHNQYQQQVNDNFEAF
WSLYKAIALYNLQQYDSAVSILNSDDADTEFTALADVSIHAQKYTYLALNEERLGNHKSACDYIIKAMGIIKSIPSNHFT
QITEQTYERIINKSL

Sequences:

>Translated_415_residues
MNTLGSRIRNLRKEKKLTLEALAGDYMTKGMLSLIENNKNNPSMESLEYIAERLGTSVSALLEDGSEVTTNNIYNEIKQI
LKVPNISYQKEIDGILSPIINEIQHNRKGAFIFKHYAFTKARINDVDNAVKYMNKAKSIYADNDDINELIEVERDYASIY
YLVRDYDKALQHAITTYETYKDDLSVTNPNIIPNLLVSIGMFCYQNYDIDDCIKYFKLAEEKCIENKTYKHLTPIYKSLC
IMYILNQDETHYRVTYKKFDNIKQLNPDDFQTNFDIFTTDIIYYFFNEEYHKLLHLLDQRDTLLKHNQYQQQVNDNFEAF
WSLYKAIALYNLQQYDSAVSILNSDDADTEFTALADVSIHAQKYTYLALNEERLGNHKSACDYIIKAMGIIKSIPSNHFT
QITEQTYERIINKSL
>Mature_415_residues
MNTLGSRIRNLRKEKKLTLEALAGDYMTKGMLSLIENNKNNPSMESLEYIAERLGTSVSALLEDGSEVTTNNIYNEIKQI
LKVPNISYQKEIDGILSPIINEIQHNRKGAFIFKHYAFTKARINDVDNAVKYMNKAKSIYADNDDINELIEVERDYASIY
YLVRDYDKALQHAITTYETYKDDLSVTNPNIIPNLLVSIGMFCYQNYDIDDCIKYFKLAEEKCIENKTYKHLTPIYKSLC
IMYILNQDETHYRVTYKKFDNIKQLNPDDFQTNFDIFTTDIIYYFFNEEYHKLLHLLDQRDTLLKHNQYQQQVNDNFEAF
WSLYKAIALYNLQQYDSAVSILNSDDADTEFTALADVSIHAQKYTYLALNEERLGNHKSACDYIIKAMGIIKSIPSNHFT
QITEQTYERIINKSL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48502; Mature: 48502

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLGSRIRNLRKEKKLTLEALAGDYMTKGMLSLIENNKNNPSMESLEYIAERLGTSVSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
LLEDGSEVTTNNIYNEIKQILKVPNISYQKEIDGILSPIINEIQHNRKGAFIFKHYAFTK
HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
ARINDVDNAVKYMNKAKSIYADNDDINELIEVERDYASIYYLVRDYDKALQHAITTYETY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDDLSVTNPNIIPNLLVSIGMFCYQNYDIDDCIKYFKLAEEKCIENKTYKHLTPIYKSLC
HCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IMYILNQDETHYRVTYKKFDNIKQLNPDDFQTNFDIFTTDIIYYFFNEEYHKLLHLLDQR
HHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
DTLLKHNQYQQQVNDNFEAFWSLYKAIALYNLQQYDSAVSILNSDDADTEFTALADVSIH
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHEEE
AQKYTYLALNEERLGNHKSACDYIIKAMGIIKSIPSNHFTQITEQTYERIINKSL
HHEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTLGSRIRNLRKEKKLTLEALAGDYMTKGMLSLIENNKNNPSMESLEYIAERLGTSVSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
LLEDGSEVTTNNIYNEIKQILKVPNISYQKEIDGILSPIINEIQHNRKGAFIFKHYAFTK
HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
ARINDVDNAVKYMNKAKSIYADNDDINELIEVERDYASIYYLVRDYDKALQHAITTYETY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDDLSVTNPNIIPNLLVSIGMFCYQNYDIDDCIKYFKLAEEKCIENKTYKHLTPIYKSLC
HCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IMYILNQDETHYRVTYKKFDNIKQLNPDDFQTNFDIFTTDIIYYFFNEEYHKLLHLLDQR
HHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
DTLLKHNQYQQQVNDNFEAFWSLYKAIALYNLQQYDSAVSILNSDDADTEFTALADVSIH
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHEEE
AQKYTYLALNEERLGNHKSACDYIIKAMGIIKSIPSNHFTQITEQTYERIINKSL
HHEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA