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The map label for this gene is patA [H]

Identifier: 222151828

GI number: 222151828

Start: 1711050

End: 1712216

Strand: Direct

Name: patA [H]

Synonym: MCCL_1585

Alternate gene names: 222151828

Gene position: 1711050-1712216 (Clockwise)

Preceding gene: 222151821

Following gene: 222151830

Centisome position: 81.39

GC content: 38.05

Gene sequence:

>1167_bases
ATGCCAACATTAAATAATAATATTTTAGAAGTAACAATTCCTGGAACAAGAGAATTTGCAAATAAAGTAGCTGGTCTGGA
CGATGCTGTTGACTTAACGCTCGGTCAGTCCGGTTTCGATGCACCACAATACATCAAAGATGCCATGGTTGAAGCGATCA
ACCATAATAAGCTGCGCTATACACATAACCGTGGTCTTATTGAACTTCGTCAGGCCATCAGTGATAAGTTAAAGCATGAC
TTCAACGTTGACTATGATGCTGAAACACAGATTGTCGTAACAAACGGAGGATCGGAAGCAATAGATGATATTTTCAGAAG
CATCATTAATCCAGGAGATGAAGTGATTATCCCCTCACCAAGTTATCTTGGATATGAACCAATTCTGAAGCTGCTTGGTG
CTAAAGTTGTGAATATTGATACACGTGATACGCATTTAATTCCGACACCAGAAGCGGTCAAAAGAGCAATCACTAAAGAT
ACGAAAGCGATTCTCTTTAACTATCCGACAAATCCAACAGGAAAGACATTGACGTATAACCAGATTAAAGGTCTTGTAAA
TGTTCTGAAAGATGAAGATATCTTTATTGTGACTGATGAGATTTATTCAGAGAATATATATGACGTAGAGCATCATTCAT
TCATCGAATTTGACAGTGTTCGTGATAGATTATTTGTTATCAATGGATTATCGAAATCACATGCAATCACTGGTGCACGT
GTCGGCTATGTTGTTTCTACTCCTGAACTTATTACACACGTTACAAGCGTTCATCTATACAACTCTATCTGTGTCGCAAC
ACCCAGTCAGTATGGAGCACTTAGCGCATTTACACATGATAATAAAGAGATTCTCGCAATGAATAAAGCGTATAAAGAAC
GTAGAGACTATCTGTATGACAAATTAACGCAGATGGGATTACCCGTAGAAAAACCTCAAGGTGCTTTCTATATCTTCCCG
GATATCTCTGCCTATAATTCTGATTCATATCAGTTTGCAACAGAATTACTAGAATCAGAACGTCTTGCAGTTGTTCCTGG
CAGTGCCTTCTCTAAATACGGAGAAGGTCATATCCGTCTTTCTTTCGCATCAACAATGAAAGAGATTAAAGAAGCCTGTG
TAAGACTTGAACGATTCCTGAATAATTATCCAAAACAATCGAAATAA

Upstream 100 bases:

>100_bases
TTTTTATTTTTATGAATGTTCTAATAATTTTATTTTTTTTTGATTCTTTATAATCATTACTGTACAATTTATAAAACAAA
CAAACGAAAGAGTGAAACAT

Downstream 100 bases:

>100_bases
ATTTATATAAAAATAAACCCATGCGCTACGAAGATTGCATATCTTCATTGCACATGGGTTATTTCTTTGTCATGATATCA
ATATAAAACAGTCTACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPTLNNNILEVTIPGTREFANKVAGLDDAVDLTLGQSGFDAPQYIKDAMVEAINHNKLRYTHNRGLIELRQAISDKLKHD
FNVDYDAETQIVVTNGGSEAIDDIFRSIINPGDEVIIPSPSYLGYEPILKLLGAKVVNIDTRDTHLIPTPEAVKRAITKD
TKAILFNYPTNPTGKTLTYNQIKGLVNVLKDEDIFIVTDEIYSENIYDVEHHSFIEFDSVRDRLFVINGLSKSHAITGAR
VGYVVSTPELITHVTSVHLYNSICVATPSQYGALSAFTHDNKEILAMNKAYKERRDYLYDKLTQMGLPVEKPQGAFYIFP
DISAYNSDSYQFATELLESERLAVVPGSAFSKYGEGHIRLSFASTMKEIKEACVRLERFLNNYPKQSK

Sequences:

>Translated_388_residues
MPTLNNNILEVTIPGTREFANKVAGLDDAVDLTLGQSGFDAPQYIKDAMVEAINHNKLRYTHNRGLIELRQAISDKLKHD
FNVDYDAETQIVVTNGGSEAIDDIFRSIINPGDEVIIPSPSYLGYEPILKLLGAKVVNIDTRDTHLIPTPEAVKRAITKD
TKAILFNYPTNPTGKTLTYNQIKGLVNVLKDEDIFIVTDEIYSENIYDVEHHSFIEFDSVRDRLFVINGLSKSHAITGAR
VGYVVSTPELITHVTSVHLYNSICVATPSQYGALSAFTHDNKEILAMNKAYKERRDYLYDKLTQMGLPVEKPQGAFYIFP
DISAYNSDSYQFATELLESERLAVVPGSAFSKYGEGHIRLSFASTMKEIKEACVRLERFLNNYPKQSK
>Mature_387_residues
PTLNNNILEVTIPGTREFANKVAGLDDAVDLTLGQSGFDAPQYIKDAMVEAINHNKLRYTHNRGLIELRQAISDKLKHDF
NVDYDAETQIVVTNGGSEAIDDIFRSIINPGDEVIIPSPSYLGYEPILKLLGAKVVNIDTRDTHLIPTPEAVKRAITKDT
KAILFNYPTNPTGKTLTYNQIKGLVNVLKDEDIFIVTDEIYSENIYDVEHHSFIEFDSVRDRLFVINGLSKSHAITGARV
GYVVSTPELITHVTSVHLYNSICVATPSQYGALSAFTHDNKEILAMNKAYKERRDYLYDKLTQMGLPVEKPQGAFYIFPD
ISAYNSDSYQFATELLESERLAVVPGSAFSKYGEGHIRLSFASTMKEIKEACVRLERFLNNYPKQSK

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=391, Percent_Identity=23.2736572890026, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI169881279, Length=391, Percent_Identity=23.2736572890026, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI56713254, Length=359, Percent_Identity=25.6267409470752, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI56713256, Length=359, Percent_Identity=25.6267409470752, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI169881281, Length=296, Percent_Identity=22.6351351351351, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI215599424, Length=403, Percent_Identity=25.0620347394541, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI19263340, Length=403, Percent_Identity=25.0620347394541, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI7705897, Length=359, Percent_Identity=24.2339832869081, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI33469970, Length=359, Percent_Identity=24.2339832869081, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1786816, Length=363, Percent_Identity=26.1707988980716, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1788722, Length=356, Percent_Identity=27.5280898876405, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1788627, Length=363, Percent_Identity=27.5482093663912, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1790797, Length=305, Percent_Identity=25.5737704918033, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994472, Length=360, Percent_Identity=23.6111111111111, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71994476, Length=360, Percent_Identity=23.6111111111111, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17567369, Length=402, Percent_Identity=23.3830845771144, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17567663, Length=347, Percent_Identity=25.0720461095101, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71981209, Length=375, Percent_Identity=23.7333333333333, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322401, Length=336, Percent_Identity=27.6785714285714, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6320317, Length=378, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28573069, Length=386, Percent_Identity=24.3523316062176, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646114, Length=386, Percent_Identity=24.3523316062176, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28573067, Length=386, Percent_Identity=24.3523316062176, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28573065, Length=386, Percent_Identity=24.3523316062176, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI45551451, Length=412, Percent_Identity=25.4854368932039, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24641770, Length=412, Percent_Identity=25.4854368932039, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641760, Length=412, Percent_Identity=25.4854368932039, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641768, Length=412, Percent_Identity=25.4854368932039, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641766, Length=412, Percent_Identity=25.4854368932039, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641764, Length=412, Percent_Identity=25.4854368932039, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 43525; Mature: 43394

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLNNNILEVTIPGTREFANKVAGLDDAVDLTLGQSGFDAPQYIKDAMVEAINHNKLRY
CCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEE
THNRGLIELRQAISDKLKHDFNVDYDAETQIVVTNGGSEAIDDIFRSIINPGDEVIIPSP
ECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCC
SYLGYEPILKLLGAKVVNIDTRDTHLIPTPEAVKRAITKDTKAILFNYPTNPTGKTLTYN
CCCCHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHH
QIKGLVNVLKDEDIFIVTDEIYSENIYDVEHHSFIEFDSVRDRLFVINGLSKSHAITGAR
HHHHHHHHHCCCCEEEEEHHHHCCCCEECCCCCEEEHHHHCCEEEEEECCCCCCCCCCCE
VGYVVSTPELITHVTSVHLYNSICVATPSQYGALSAFTHDNKEILAMNKAYKERRDYLYD
EEEEEECHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHH
KLTQMGLPVEKPQGAFYIFPDISAYNSDSYQFATELLESERLAVVPGSAFSKYGEGHIRL
HHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEE
SFASTMKEIKEACVRLERFLNNYPKQSK
EHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PTLNNNILEVTIPGTREFANKVAGLDDAVDLTLGQSGFDAPQYIKDAMVEAINHNKLRY
CCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEE
THNRGLIELRQAISDKLKHDFNVDYDAETQIVVTNGGSEAIDDIFRSIINPGDEVIIPSP
ECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCC
SYLGYEPILKLLGAKVVNIDTRDTHLIPTPEAVKRAITKDTKAILFNYPTNPTGKTLTYN
CCCCHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHH
QIKGLVNVLKDEDIFIVTDEIYSENIYDVEHHSFIEFDSVRDRLFVINGLSKSHAITGAR
HHHHHHHHHCCCCEEEEEHHHHCCCCEECCCCCEEEHHHHCCEEEEEECCCCCCCCCCCE
VGYVVSTPELITHVTSVHLYNSICVATPSQYGALSAFTHDNKEILAMNKAYKERRDYLYD
EEEEEECHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHH
KLTQMGLPVEKPQGAFYIFPDISAYNSDSYQFATELLESERLAVVPGSAFSKYGEGHIRL
HHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEE
SFASTMKEIKEACVRLERFLNNYPKQSK
EHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2104615 [H]