| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ymcC [H]
Identifier: 222151720
GI number: 222151720
Start: 1594995
End: 1595555
Strand: Direct
Name: ymcC [H]
Synonym: MCCL_1473
Alternate gene names: 222151720
Gene position: 1594995-1595555 (Clockwise)
Preceding gene: 222151719
Following gene: 222151721
Centisome position: 75.87
GC content: 31.73
Gene sequence:
>561_bases ATGGATGGAGTGAGTAAAGTGAGTATCATCATAACATTAATCATTGCAGCTGAAATTCTATTTTGGGTGTTCATAGTTCT CGGATTAGTAACAAGATATATATTTCATAAAGAAAAACTTAGTATGTCATTATTATCATGTACAATACTAGTTGACCTGT TTTTAATTATCGCTACAACATTCAATCTATACCAAGGTGGAACAGCAGAAATTGCACATGGTATCGCTGCTGTATACATT TCTATTTCAATTGTATTCGGTAAAGACTTTATCAATTGGGCAGATGAAAAATTTAAAGTATTATACTTAAAACAAACACC TCCTCAAAAAATATACGGAAACCAATATGCAAAGCAATACTTAAAGAGCTTTTTTAAACACATCATTGCATTTCTTATCG CATATGGGCTTATCTACCTGATGCAGGTTGTTGCAAACAATCCGTCGTCTCTGAATAATTTAATGGGCGTAATAAATATA TGGAAGATTGTCCTCATCATTGATTTTATCATCACAATCAGTTATTTTATTTGGCCGAAGAAAGCGAAATTAGATACTTG A
Upstream 100 bases:
>100_bases TGCATGCTTTAATTGATGGATTAGCGTTACATAAACTTTATCAGCCGAAACAATTATCAAACACTTTAGTAGAACAAATC ATAACGGAAGAAATTCAATC
Downstream 100 bases:
>100_bases TAATTATTGAAACAAAATAGATAACCGGATCAAATTTTTAAAGTATTTGATCCGGTTATTTAATTTACATTTTCCGCTAC ATTATCGCCAATTATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MDGVSKVSIIITLIIAAEILFWVFIVLGLVTRYIFHKEKLSMSLLSCTILVDLFLIIATTFNLYQGGTAEIAHGIAAVYI SISIVFGKDFINWADEKFKVLYLKQTPPQKIYGNQYAKQYLKSFFKHIIAFLIAYGLIYLMQVVANNPSSLNNLMGVINI WKIVLIIDFIITISYFIWPKKAKLDT
Sequences:
>Translated_186_residues MDGVSKVSIIITLIIAAEILFWVFIVLGLVTRYIFHKEKLSMSLLSCTILVDLFLIIATTFNLYQGGTAEIAHGIAAVYI SISIVFGKDFINWADEKFKVLYLKQTPPQKIYGNQYAKQYLKSFFKHIIAFLIAYGLIYLMQVVANNPSSLNNLMGVINI WKIVLIIDFIITISYFIWPKKAKLDT >Mature_186_residues MDGVSKVSIIITLIIAAEILFWVFIVLGLVTRYIFHKEKLSMSLLSCTILVDLFLIIATTFNLYQGGTAEIAHGIAAVYI SISIVFGKDFINWADEKFKVLYLKQTPPQKIYGNQYAKQYLKSFFKHIIAFLIAYGLIYLMQVVANNPSSLNNLMGVINI WKIVLIIDFIITISYFIWPKKAKLDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21182; Mature: 21182
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGVSKVSIIITLIIAAEILFWVFIVLGLVTRYIFHKEKLSMSLLSCTILVDLFLIIATT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNLYQGGTAEIAHGIAAVYISISIVFGKDFINWADEKFKVLYLKQTPPQKIYGNQYAKQY HHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEECCCCHHHHCCHHHHHH LKSFFKHIIAFLIAYGLIYLMQVVANNPSSLNNLMGVINIWKIVLIIDFIITISYFIWPK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAKLDT CCCCCC >Mature Secondary Structure MDGVSKVSIIITLIIAAEILFWVFIVLGLVTRYIFHKEKLSMSLLSCTILVDLFLIIATT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNLYQGGTAEIAHGIAAVYISISIVFGKDFINWADEKFKVLYLKQTPPQKIYGNQYAKQY HHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEECCCCHHHHCCHHHHHH LKSFFKHIIAFLIAYGLIYLMQVVANNPSSLNNLMGVINIWKIVLIIDFIITISYFIWPK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAKLDT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]