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The map label for this gene is tnp [H]

Identifier: 222151694

GI number: 222151694

Start: 1567040

End: 1567771

Strand: Direct

Name: tnp [H]

Synonym: MCCL_1447

Alternate gene names: 222151694

Gene position: 1567040-1567771 (Clockwise)

Preceding gene: 222151693

Following gene: 222151698

Centisome position: 74.54

GC content: 29.51

Gene sequence:

>732_bases
TTGATTAAAGAAATCATTAACAAACATAAAAATAGGATAGGTTATCGTACAGTAACCGACGAACTAAGAGAGTTAGGTTT
TGTAGTTAACCATAAAAAAGTTCTTAGAATAATGAGAGAAAATAATTTACTTTGTACAAAGTTTAAGCATAGAAATAGAA
CATATAAGTCGTACAAAGGGAAAGTTGGCAAAACAGCTAAGAATAAATTGAATCGTAGATTCATAACTAATCGCCCATAT
CAAAAATTACTTACGGATGTAACACAATTCAACATTAAAAATGGAACTAAGCTATATCTGTCAACAATTTTTGATGTATG
TTCGAAAGAGATTATTTCTTATTCAATTAGTAAGCGTCCAACATTGAAATTCGTTATGGAATCATTGTTAAAAGCAATTA
ATGTAATTCCAGACCTTCCCTGTAGAACTACAATCCATACCGATCAAGGGTGGCAATATCAGCATAAATCTTGGGTACAA
ACTTTGAAAAAGAATAGAATTATTCAAAGCATGTCTAGAAAAGGTAATTGTCTTGATAATTCTCCGATGGAGAATTTCTT
TGGTATTTTAAAACAAGAAATGTTTTATGGAGAAACATTTGATTCTTATGATGAACTAGAAGAGGAGATTATTGACTATA
TGGAGTATTATAATTTAGTCAGAAAGAAGAGAAAATTAAAAAGCAAGACTCCTGTAGAATACAGAAATCTTGCTTTAATG
AAAGTAGCTTAA

Upstream 100 bases:

>100_bases
AAAAGAAATATTATCAGTAGCTATGATAGCGAAAAGTGTATACCATTAGTGGAAATTACGACTTAGTGTCACTAAACATA
AAGACAATTATTTAATTACT

Downstream 100 bases:

>100_bases
TAAAAAGTTCAACTTTTTGGGTTCACTACATTCGCCGGTCTTCTTACTATCTATTTTCAACATTAACGTGCTGTAATTTC
TTCCAGTAGTAATAGCCATA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIKEIINKHKNRIGYRTVTDELRELGFVVNHKKVLRIMRENNLLCTKFKHRNRTYKSYKGKVGKTAKNKLNRRFITNRPY
QKLLTDVTQFNIKNGTKLYLSTIFDVCSKEIISYSISKRPTLKFVMESLLKAINVIPDLPCRTTIHTDQGWQYQHKSWVQ
TLKKNRIIQSMSRKGNCLDNSPMENFFGILKQEMFYGETFDSYDELEEEIIDYMEYYNLVRKKRKLKSKTPVEYRNLALM
KVA

Sequences:

>Translated_243_residues
MIKEIINKHKNRIGYRTVTDELRELGFVVNHKKVLRIMRENNLLCTKFKHRNRTYKSYKGKVGKTAKNKLNRRFITNRPY
QKLLTDVTQFNIKNGTKLYLSTIFDVCSKEIISYSISKRPTLKFVMESLLKAINVIPDLPCRTTIHTDQGWQYQHKSWVQ
TLKKNRIIQSMSRKGNCLDNSPMENFFGILKQEMFYGETFDSYDELEEEIIDYMEYYNLVRKKRKLKSKTPVEYRNLALM
KVA
>Mature_243_residues
MIKEIINKHKNRIGYRTVTDELRELGFVVNHKKVLRIMRENNLLCTKFKHRNRTYKSYKGKVGKTAKNKLNRRFITNRPY
QKLLTDVTQFNIKNGTKLYLSTIFDVCSKEIISYSISKRPTLKFVMESLLKAINVIPDLPCRTTIHTDQGWQYQHKSWVQ
TLKKNRIIQSMSRKGNCLDNSPMENFFGILKQEMFYGETFDSYDELEEEIIDYMEYYNLVRKKRKLKSKTPVEYRNLALM
KVA

Specific function: Involved in the transposition of the insertion sequence IS150 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=239, Percent_Identity=45.1882845188285, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1788405, Length=244, Percent_Identity=30.327868852459, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787263, Length=244, Percent_Identity=30.327868852459, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786753, Length=244, Percent_Identity=30.327868852459, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786570, Length=244, Percent_Identity=30.327868852459, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786490, Length=244, Percent_Identity=30.327868852459, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 28971; Mature: 28971

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEIINKHKNRIGYRTVTDELRELGFVVNHKKVLRIMRENNLLCTKFKHRNRTYKSYKG
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHHHHCC
KVGKTAKNKLNRRFITNRPYQKLLTDVTQFNIKNGTKLYLSTIFDVCSKEIISYSISKRP
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TLKFVMESLLKAINVIPDLPCRTTIHTDQGWQYQHKSWVQTLKKNRIIQSMSRKGNCLDN
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SPMENFFGILKQEMFYGETFDSYDELEEEIIDYMEYYNLVRKKRKLKSKTPVEYRNLALM
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEE
KVA
ECC
>Mature Secondary Structure
MIKEIINKHKNRIGYRTVTDELRELGFVVNHKKVLRIMRENNLLCTKFKHRNRTYKSYKG
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHHHHCC
KVGKTAKNKLNRRFITNRPYQKLLTDVTQFNIKNGTKLYLSTIFDVCSKEIISYSISKRP
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TLKFVMESLLKAINVIPDLPCRTTIHTDQGWQYQHKSWVQTLKKNRIIQSMSRKGNCLDN
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SPMENFFGILKQEMFYGETFDSYDELEEEIIDYMEYYNLVRKKRKLKSKTPVEYRNLALM
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEE
KVA
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841644; 2541046; 8041620; 9278503 [H]