| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ytoA [H]
Identifier: 222151688
GI number: 222151688
Start: 1562597
End: 1563112
Strand: Direct
Name: ytoA [H]
Synonym: MCCL_1441
Alternate gene names: 222151688
Gene position: 1562597-1563112 (Clockwise)
Preceding gene: 222151685
Following gene: 222151693
Centisome position: 74.33
GC content: 42.25
Gene sequence:
>516_bases ATGTTATATGAATATGAAGGTAAGCTTCCTCAAATCGATGATACAGCCTTTATAGCTCCAAACGCAGTAATAACTGGAGA TGTCTCTGTCGGTCGTGATGCTACAATATGGTATGGCACAGTAATTCGAGGAGATGTAGCACCTGTATCAATCGGAAACG GAACAAATGTACAGGATTTATGTTGTTTGCACCAGTCAGGTGGAAAACCACTTATTATCGAAGACAACGTAACAATCGGT CACCGCGTCACTCTCCATTCACCGATTATTCGTAAAAATGCATTGATCGGGATGGATTCTACCATTCTTGACGGGGCTGA AATCGGAGAAAACGCATTTATCGGTGCTGGTTCTCTTGTGCCACCCGGGAAGAAGATTCCACCCAATACATTAGCATTTG GACGCCCGGCCAAAGTCATTCGAGAACTGACAGAGGAAGATAAAGCAGAAATGGCCGCGAATATTGAACGTTATATCTCT AAAGGGAAACAATATAAAAAGATGCATGAACAATAA
Upstream 100 bases:
>100_bases TTCCCACTTCCACATAATGATGCTCCTTTATATTTCATACTACTTCTTATTAATGATAAAATTATTATAACAAATAATTT TATTTCATGGAGGGAAATAT
Downstream 100 bases:
>100_bases AAATGGGCGAGAGAAATATCTCTCACCCATTTTTATTAAGCGATTCCGAACTTTTTATGCATAAATGGTAAGCCTGCAAT AATAAAGCTTAATAGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MLYEYEGKLPQIDDTAFIAPNAVITGDVSVGRDATIWYGTVIRGDVAPVSIGNGTNVQDLCCLHQSGGKPLIIEDNVTIG HRVTLHSPIIRKNALIGMDSTILDGAEIGENAFIGAGSLVPPGKKIPPNTLAFGRPAKVIRELTEEDKAEMAANIERYIS KGKQYKKMHEQ
Sequences:
>Translated_171_residues MLYEYEGKLPQIDDTAFIAPNAVITGDVSVGRDATIWYGTVIRGDVAPVSIGNGTNVQDLCCLHQSGGKPLIIEDNVTIG HRVTLHSPIIRKNALIGMDSTILDGAEIGENAFIGAGSLVPPGKKIPPNTLAFGRPAKVIRELTEEDKAEMAANIERYIS KGKQYKKMHEQ >Mature_171_residues MLYEYEGKLPQIDDTAFIAPNAVITGDVSVGRDATIWYGTVIRGDVAPVSIGNGTNVQDLCCLHQSGGKPLIIEDNVTIG HRVTLHSPIIRKNALIGMDSTILDGAEIGENAFIGAGSLVPPGKKIPPNTLAFGRPAKVIRELTEEDKAEMAANIERYIS KGKQYKKMHEQ
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=172, Percent_Identity=40.1162790697674, Blast_Score=122, Evalue=1e-29, Organism=Escherichia coli, GI1787667, Length=166, Percent_Identity=35.5421686746988, Blast_Score=121, Evalue=3e-29, Organism=Escherichia coli, GI87081681, Length=169, Percent_Identity=34.9112426035503, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18468; Mature: 18468
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYEYEGKLPQIDDTAFIAPNAVITGDVSVGRDATIWYGTVIRGDVAPVSIGNGTNVQDL CCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEEEECCCCEEEECCCCCHHHH CCLHQSGGKPLIIEDNVTIGHRVTLHSPIIRKNALIGMDSTILDGAEIGENAFIGAGSLV HHHHCCCCCEEEEECCCCCCEEEEECCCCHHCCEEECCCCHHCCCHHCCCCEEECCCCCC PPGKKIPPNTLAFGRPAKVIRELTEEDKAEMAANIERYISKGKQYKKMHEQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MLYEYEGKLPQIDDTAFIAPNAVITGDVSVGRDATIWYGTVIRGDVAPVSIGNGTNVQDL CCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEEEECCCCEEEECCCCCHHHH CCLHQSGGKPLIIEDNVTIGHRVTLHSPIIRKNALIGMDSTILDGAEIGENAFIGAGSLV HHHHCCCCCEEEEECCCCCCEEEEECCCCHHCCEEECCCCHHCCCHHCCCCEEECCCCCC PPGKKIPPNTLAFGRPAKVIRELTEEDKAEMAANIERYISKGKQYKKMHEQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]