| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is uspF [C]
Identifier: 222151624
GI number: 222151624
Start: 1493715
End: 1494215
Strand: Direct
Name: uspF [C]
Synonym: MCCL_1377
Alternate gene names: 222151624
Gene position: 1493715-1494215 (Clockwise)
Preceding gene: 222151622
Following gene: 222151630
Centisome position: 71.05
GC content: 39.92
Gene sequence:
>501_bases ATGTTAGTGTATAAAAATATCTTAATCGCAGTCGATGGATCAAGTGAAGCGGAATGGGCCTTCAATAAAGCTGTGGAAGT TGCTAAGCGTAACAATGCAACATTATCGATTATCAATGTTATCGATACAAGAAGCTATGCAAGTGTCGAAGCTTATGACC GCTCTATTTCAGAACGCGCAACACAGTTTGCAGAGTCATTGCTTGATGGTTACAAAAGAGTAGCACAAAGCCGTGGTGTA TCAAACGTCGATACTTTAATCGAATACGGTTCACCTAAGACGATTATTCCTAAGAAAATCGCACAAAAATTAGGAGCAGA CTTAATCATGTGTGGTTCAACTGGACTTAATGCGGTTGAACGTTTCATTATCGGATCAGTATCAGAGGCCATCGTACGTC ATGCAGAATGTGACGTATTAGTTGTCAGAACTGAAACAATGCCACATAACTTCCAGCCAGAAGTTGCTACAAAAGAACTG CTAGAAGAACATAAACAGTAG
Upstream 100 bases:
>100_bases AGTATTCAGAATATATAAAATGTTTACAATTCTATTATTACATTCTAAACATTAGTGATATAATAAAAGTGTAATAAAGA TCGTAAATGGAGGGATTTTT
Downstream 100 bases:
>100_bases ATAAAGCTGTTAGTTCATATCATTATCTATAAGATAATCTATTATTGTAAAAAAAGGTCAGAACAATAGTTCCGACCTTT TTTCATATTATTTTAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MLVYKNILIAVDGSSEAEWAFNKAVEVAKRNNATLSIINVIDTRSYASVEAYDRSISERATQFAESLLDGYKRVAQSRGV SNVDTLIEYGSPKTIIPKKIAQKLGADLIMCGSTGLNAVERFIIGSVSEAIVRHAECDVLVVRTETMPHNFQPEVATKEL LEEHKQ
Sequences:
>Translated_166_residues MLVYKNILIAVDGSSEAEWAFNKAVEVAKRNNATLSIINVIDTRSYASVEAYDRSISERATQFAESLLDGYKRVAQSRGV SNVDTLIEYGSPKTIIPKKIAQKLGADLIMCGSTGLNAVERFIIGSVSEAIVRHAECDVLVVRTETMPHNFQPEVATKEL LEEHKQ >Mature_166_residues MLVYKNILIAVDGSSEAEWAFNKAVEVAKRNNATLSIINVIDTRSYASVEAYDRSISERATQFAESLLDGYKRVAQSRGV SNVDTLIEYGSPKTIIPKKIAQKLGADLIMCGSTGLNAVERFIIGSVSEAIVRHAECDVLVVRTETMPHNFQPEVATKEL LEEHKQ
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 18314; Mature: 18314
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVYKNILIAVDGSSEAEWAFNKAVEVAKRNNATLSIINVIDTRSYASVEAYDRSISERA CEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHH TQFAESLLDGYKRVAQSRGVSNVDTLIEYGSPKTIIPKKIAQKLGADLIMCGSTGLNAVE HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHH RFIIGSVSEAIVRHAECDVLVVRTETMPHNFQPEVATKELLEEHKQ HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLVYKNILIAVDGSSEAEWAFNKAVEVAKRNNATLSIINVIDTRSYASVEAYDRSISERA CEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHH TQFAESLLDGYKRVAQSRGVSNVDTLIEYGSPKTIIPKKIAQKLGADLIMCGSTGLNAVE HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHH RFIIGSVSEAIVRHAECDVLVVRTETMPHNFQPEVATKELLEEHKQ HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA