| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is expZ [H]
Identifier: 222151281
GI number: 222151281
Start: 1140420
End: 1141940
Strand: Direct
Name: expZ [H]
Synonym: MCCL_1034
Alternate gene names: 222151281
Gene position: 1140420-1141940 (Clockwise)
Preceding gene: 222151280
Following gene: 222151283
Centisome position: 54.25
GC content: 30.37
Gene sequence:
>1521_bases TTGATGCTACAATTTCACAATATTCATAAACAAGTAAAAGATACTACTTTATTCAAAATAGACCAATTAAAGATTAACCA AGGAGATAAGATTGGCTTAATCGGTAAAAATGGTTGTGGAAAATCAACTTTGCTAAAAATGATTGCACATATAGATACTT CATATTCAGGTGTAATAACTAATCCGTTTCAAACAAAATATGTTCCGCAATTAAAAGAAATAACGATCCAGTCAGGTGGG GAACAGACGAAAAGTTACTTACTTGATGCTTTCAACAGCAATAATGCGTTATTGTTACTTGATGAGCCATCCACTAATTT AGATATAAACAATATCAAGTGGCTCATCAATCAAATCAATCAATTTCAAGGAACAATGATAATCGTGAGTCACGATAGAT CATTGCTCAATCAAACAGTACAAAAAATAATAGAAATAGAAGAGAAAAAACTTAATATATATACCGGTAACTATGATGAT TACGATGAACAAAAAAAGAAACAATATGAGCAGCAATTAAAAGAATATGAACAGTATCAAAAGAAAATTAATCAACTCCA GCAAGAATCAATTGAAAGAAATAAACATGCCTCAAACTTTAAAAAAAGAAAGAAGAATATTAGTATTTCCGACTATAAAG TTAACTCAAGGATGGGTGCTTATGACAGTCAGGAAAAAGCAATCGCTAAATCAAGTAAAGTTCTGCAAAAACGAATTGAA CAAATAGAAAAAGTAGAAAAGCCTCTGAGTGACAAACAATTTAAGATTAAAGCAATAGGTAAATTAAAACATACTGGTGC TACGTTAATTCATTTAGATAGTTTTACCGTTAGCGTTGAAAATCATCTAATATTTCAATCGGGCATCTTCAAGCTAGTTC AAGGGGATAAAATTGCAATAACTGGATCGAACGGGAGTGGTAAGACAACTTTTATTAGACAATTAATTGAAAAGCAAATT AATGGCTACTATAAACCAAATTTAAAAATAGGCTATTTTGCGCAAAATTTAACGACGTTAGATGAACAAAAAAGTATACT TGAGAATGTACGAAGTACATCTGTACAGGCCGATATGCTTATTAGAAATGTACTCGCTGCATTAGGATTTGATTATTCTA GATTGAATCAAATTGTTAAGTTTATATCCGGCGGAGAACGTGTCAGACTACAAATCATAAAGTTATTACTCGGGGACTAT GATATGCTGATCCTAGATGAACCGACAAATTTTCTGGATGTTTCTACATTGCAAGCATTAGAGCACTTCTTAAAAGATTA TCCTGGAAGTTTTCTGATTGTATCTCATGATGAGCAATTTATAAATAATACGACAAAGAATAAATTTGTCATAAAACAAC AACAATTATTAGATGACACAAAACAGAAAGAATATCAAACGACTGATAGTAGTCACTTACAGCTATTAGAATATAAATTA GAACAAATGATACTTGATCCTGACATAAATATACAGGATGTTATCAAACTTAAAAAGAAAATAGAAAATCTTAAAAAGTA A
Upstream 100 bases:
>100_bases TTGAATACAATATGATAATTTATGATGACAGGTTTACTATGTCCTTTTTTAATATCATCATTTGGACTTTCATATATTAA AAGATGAAAGGAAGAATGAC
Downstream 100 bases:
>100_bases TCAAAATTCATAAAACAAAAAACTTTCAGGTCTCCTGAAAGTTTTTTATCGTTTAATCACAAGCTCTGAAAAGTTATAGA ATCCAGCAGTAGTTACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MMLQFHNIHKQVKDTTLFKIDQLKINQGDKIGLIGKNGCGKSTLLKMIAHIDTSYSGVITNPFQTKYVPQLKEITIQSGG EQTKSYLLDAFNSNNALLLLDEPSTNLDINNIKWLINQINQFQGTMIIVSHDRSLLNQTVQKIIEIEEKKLNIYTGNYDD YDEQKKKQYEQQLKEYEQYQKKINQLQQESIERNKHASNFKKRKKNISISDYKVNSRMGAYDSQEKAIAKSSKVLQKRIE QIEKVEKPLSDKQFKIKAIGKLKHTGATLIHLDSFTVSVENHLIFQSGIFKLVQGDKIAITGSNGSGKTTFIRQLIEKQI NGYYKPNLKIGYFAQNLTTLDEQKSILENVRSTSVQADMLIRNVLAALGFDYSRLNQIVKFISGGERVRLQIIKLLLGDY DMLILDEPTNFLDVSTLQALEHFLKDYPGSFLIVSHDEQFINNTTKNKFVIKQQQLLDDTKQKEYQTTDSSHLQLLEYKL EQMILDPDINIQDVIKLKKKIENLKK
Sequences:
>Translated_506_residues MMLQFHNIHKQVKDTTLFKIDQLKINQGDKIGLIGKNGCGKSTLLKMIAHIDTSYSGVITNPFQTKYVPQLKEITIQSGG EQTKSYLLDAFNSNNALLLLDEPSTNLDINNIKWLINQINQFQGTMIIVSHDRSLLNQTVQKIIEIEEKKLNIYTGNYDD YDEQKKKQYEQQLKEYEQYQKKINQLQQESIERNKHASNFKKRKKNISISDYKVNSRMGAYDSQEKAIAKSSKVLQKRIE QIEKVEKPLSDKQFKIKAIGKLKHTGATLIHLDSFTVSVENHLIFQSGIFKLVQGDKIAITGSNGSGKTTFIRQLIEKQI NGYYKPNLKIGYFAQNLTTLDEQKSILENVRSTSVQADMLIRNVLAALGFDYSRLNQIVKFISGGERVRLQIIKLLLGDY DMLILDEPTNFLDVSTLQALEHFLKDYPGSFLIVSHDEQFINNTTKNKFVIKQQQLLDDTKQKEYQTTDSSHLQLLEYKL EQMILDPDINIQDVIKLKKKIENLKK >Mature_506_residues MMLQFHNIHKQVKDTTLFKIDQLKINQGDKIGLIGKNGCGKSTLLKMIAHIDTSYSGVITNPFQTKYVPQLKEITIQSGG EQTKSYLLDAFNSNNALLLLDEPSTNLDINNIKWLINQINQFQGTMIIVSHDRSLLNQTVQKIIEIEEKKLNIYTGNYDD YDEQKKKQYEQQLKEYEQYQKKINQLQQESIERNKHASNFKKRKKNISISDYKVNSRMGAYDSQEKAIAKSSKVLQKRIE QIEKVEKPLSDKQFKIKAIGKLKHTGATLIHLDSFTVSVENHLIFQSGIFKLVQGDKIAITGSNGSGKTTFIRQLIEKQI NGYYKPNLKIGYFAQNLTTLDEQKSILENVRSTSVQADMLIRNVLAALGFDYSRLNQIVKFISGGERVRLQIIKLLLGDY DMLILDEPTNFLDVSTLQALEHFLKDYPGSFLIVSHDEQFINNTTKNKFVIKQQQLLDDTKQKEYQTTDSSHLQLLEYKL EQMILDPDINIQDVIKLKKKIENLKK
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=395, Percent_Identity=27.8481012658228, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI27881506, Length=388, Percent_Identity=27.0618556701031, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI10947137, Length=388, Percent_Identity=27.0618556701031, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI69354671, Length=410, Percent_Identity=27.0731707317073, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI10947135, Length=410, Percent_Identity=27.0731707317073, Blast_Score=122, Evalue=9e-28, Organism=Escherichia coli, GI1789751, Length=423, Percent_Identity=28.6052009456265, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI1787182, Length=384, Percent_Identity=30.46875, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1787041, Length=407, Percent_Identity=27.027027027027, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI2367384, Length=382, Percent_Identity=26.9633507853403, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17559834, Length=402, Percent_Identity=28.8557213930348, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17553372, Length=390, Percent_Identity=31.5384615384615, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17555318, Length=395, Percent_Identity=26.5822784810127, Blast_Score=131, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6321121, Length=389, Percent_Identity=30.8483290488432, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6320874, Length=393, Percent_Identity=25.9541984732824, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6325030, Length=190, Percent_Identity=29.4736842105263, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324314, Length=179, Percent_Identity=34.0782122905028, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323278, Length=191, Percent_Identity=31.413612565445, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24666836, Length=420, Percent_Identity=27.6190476190476, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI24641342, Length=399, Percent_Identity=28.0701754385965, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI24642252, Length=384, Percent_Identity=27.34375, Blast_Score=132, Evalue=8e-31, Organism=Drosophila melanogaster, GI18859989, Length=384, Percent_Identity=27.34375, Blast_Score=132, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 58291; Mature: 58291
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLQFHNIHKQVKDTTLFKIDQLKINQGDKIGLIGKNGCGKSTLLKMIAHIDTSYSGVIT CEEEHHHHHHHHHHHHEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEE NPFQTKYVPQLKEITIQSGGEQTKSYLLDAFNSNNALLLLDEPSTNLDINNIKWLINQIN CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHH QFQGTMIIVSHDRSLLNQTVQKIIEIEEKKLNIYTGNYDDYDEQKKKQYEQQLKEYEQYQ HCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH KKINQLQQESIERNKHASNFKKRKKNISISDYKVNSRMGAYDSQEKAIAKSSKVLQKRIE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH QIEKVEKPLSDKQFKIKAIGKLKHTGATLIHLDSFTVSVENHLIFQSGIFKLVQGDKIAI HHHHHHCCCCCCCEEEEEHHHHHCCCCEEEEEECEEEEECCEEEEHHHHHHHCCCCEEEE TGSNGSGKTTFIRQLIEKQINGYYKPNLKIGYFAQNLTTLDEQKSILENVRSTSVQADML ECCCCCCHHHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHH IRNVLAALGFDYSRLNQIVKFISGGERVRLQIIKLLLGDYDMLILDEPTNFLDVSTLQAL HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH EHFLKDYPGSFLIVSHDEQFINNTTKNKFVIKQQQLLDDTKQKEYQTTDSSHLQLLEYKL HHHHHHCCCCEEEEECCHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH EQMILDPDINIQDVIKLKKKIENLKK HHHHCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MMLQFHNIHKQVKDTTLFKIDQLKINQGDKIGLIGKNGCGKSTLLKMIAHIDTSYSGVIT CEEEHHHHHHHHHHHHEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEE NPFQTKYVPQLKEITIQSGGEQTKSYLLDAFNSNNALLLLDEPSTNLDINNIKWLINQIN CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHH QFQGTMIIVSHDRSLLNQTVQKIIEIEEKKLNIYTGNYDDYDEQKKKQYEQQLKEYEQYQ HCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH KKINQLQQESIERNKHASNFKKRKKNISISDYKVNSRMGAYDSQEKAIAKSSKVLQKRIE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH QIEKVEKPLSDKQFKIKAIGKLKHTGATLIHLDSFTVSVENHLIFQSGIFKLVQGDKIAI HHHHHHCCCCCCCEEEEEHHHHHCCCCEEEEEECEEEEECCEEEEHHHHHHHCCCCEEEE TGSNGSGKTTFIRQLIEKQINGYYKPNLKIGYFAQNLTTLDEQKSILENVRSTSVQADML ECCCCCCHHHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHH IRNVLAALGFDYSRLNQIVKFISGGERVRLQIIKLLLGDYDMLILDEPTNFLDVSTLQAL HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH EHFLKDYPGSFLIVSHDEQFINNTTKNKFVIKQQQLLDDTKQKEYQTTDSSHLQLLEYKL HHHHHHCCCCEEEEECCHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH EQMILDPDINIQDVIKLKKKIENLKK HHHHCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]