| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151273
Identifier: 222151273
GI number: 222151273
Start: 1133980
End: 1134465
Strand: Direct
Name: 222151273
Synonym: MCCL_1026
Alternate gene names: NA
Gene position: 1133980-1134465 (Clockwise)
Preceding gene: 222151272
Following gene: 222151274
Centisome position: 53.94
GC content: 36.63
Gene sequence:
>486_bases TTGAGTGAAATATGGGAACTTCTAGATATGAATAGACAAAAAACTGGTATCCTCCATGAAAGAGGCGTTACAGTACCTGA TGGATTGTACCATTTAGTAGTAGAAATCTGGATACAGAAACCAAATGGCGATTTACTACTTACACAACGTCATCCTGATA AACCACTTGGTTTGAAATGGGAATGTAGTCGAGGATCTGCTGTTGCAGGAGAAGATGGTGTACTTGCTGCACATCGTGAG TTACTTGAAGAAGCAGGTATATTTGCGCCTTTAGATGATATTCAATTCAAAGGTTATACCATGCATTCACATTATATTAC TGAGACTTATCTATACGAATCACCAACTAATGACATTACATTTAATCTTCAGGCTGAAGAAGTTGTTGATGCTAAGTGGG TAGCACCGAATGAAATTGAACGAAATTTAGATGAAGTAATACCAGATTTATGGCATAGATATTGTAAGTATATTAAAGTG GGGTAG
Upstream 100 bases:
>100_bases GAAGAATTTGAAGTACAACGTAAGTATTATGAAGATTTTAATATGGTAATACCTAAATGGTATAAATAATATTGCGAATT ACATCATTGGAGGGATACAC
Downstream 100 bases:
>100_bases TTAACATACGTAATTTGAAGTTTGAGTTTGACCTTTTCTTTATATCAGAAGCTTTCTTAAATGAACATCAGCATAATTTA TTAAACACCTTAGTTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKWECSRGSAVAGEDGVLAAHRE LLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDITFNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKV G
Sequences:
>Translated_161_residues MSEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKWECSRGSAVAGEDGVLAAHRE LLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDITFNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKV G >Mature_160_residues SEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKWECSRGSAVAGEDGVLAAHREL LEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDITFNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKVG
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 18529; Mature: 18398
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKW CHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEE ECSRGSAVAGEDGVLAAHRELLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDIT ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCEE FNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKVG EEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKW HHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEE ECSRGSAVAGEDGVLAAHRELLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDIT ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCEE FNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKVG EEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]