Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222151273

Identifier: 222151273

GI number: 222151273

Start: 1133980

End: 1134465

Strand: Direct

Name: 222151273

Synonym: MCCL_1026

Alternate gene names: NA

Gene position: 1133980-1134465 (Clockwise)

Preceding gene: 222151272

Following gene: 222151274

Centisome position: 53.94

GC content: 36.63

Gene sequence:

>486_bases
TTGAGTGAAATATGGGAACTTCTAGATATGAATAGACAAAAAACTGGTATCCTCCATGAAAGAGGCGTTACAGTACCTGA
TGGATTGTACCATTTAGTAGTAGAAATCTGGATACAGAAACCAAATGGCGATTTACTACTTACACAACGTCATCCTGATA
AACCACTTGGTTTGAAATGGGAATGTAGTCGAGGATCTGCTGTTGCAGGAGAAGATGGTGTACTTGCTGCACATCGTGAG
TTACTTGAAGAAGCAGGTATATTTGCGCCTTTAGATGATATTCAATTCAAAGGTTATACCATGCATTCACATTATATTAC
TGAGACTTATCTATACGAATCACCAACTAATGACATTACATTTAATCTTCAGGCTGAAGAAGTTGTTGATGCTAAGTGGG
TAGCACCGAATGAAATTGAACGAAATTTAGATGAAGTAATACCAGATTTATGGCATAGATATTGTAAGTATATTAAAGTG
GGGTAG

Upstream 100 bases:

>100_bases
GAAGAATTTGAAGTACAACGTAAGTATTATGAAGATTTTAATATGGTAATACCTAAATGGTATAAATAATATTGCGAATT
ACATCATTGGAGGGATACAC

Downstream 100 bases:

>100_bases
TTAACATACGTAATTTGAAGTTTGAGTTTGACCTTTTCTTTATATCAGAAGCTTTCTTAAATGAACATCAGCATAATTTA
TTAAACACCTTAGTTGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKWECSRGSAVAGEDGVLAAHRE
LLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDITFNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKV
G

Sequences:

>Translated_161_residues
MSEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKWECSRGSAVAGEDGVLAAHRE
LLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDITFNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKV
G
>Mature_160_residues
SEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKWECSRGSAVAGEDGVLAAHREL
LEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDITFNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKVG

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 18529; Mature: 18398

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKW
CHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEE
ECSRGSAVAGEDGVLAAHRELLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDIT
ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCEE
FNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKVG
EEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEIWELLDMNRQKTGILHERGVTVPDGLYHLVVEIWIQKPNGDLLLTQRHPDKPLGLKW
HHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEE
ECSRGSAVAGEDGVLAAHRELLEEAGIFAPLDDIQFKGYTMHSHYITETYLYESPTNDIT
ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCEE
FNLQAEEVVDAKWVAPNEIERNLDEVIPDLWHRYCKYIKVG
EEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]