| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151221
Identifier: 222151221
GI number: 222151221
Start: 1064668
End: 1065189
Strand: Direct
Name: 222151221
Synonym: MCCL_0972
Alternate gene names: NA
Gene position: 1064668-1065189 (Clockwise)
Preceding gene: 222151220
Following gene: 222151222
Centisome position: 50.64
GC content: 33.72
Gene sequence:
>522_bases ATGACAAACGAAGTAAAAGTATTAATAACTCAATACGTTAATGAAAAAGGTGTATTAAAAGACGATAGTAAAAAAGAAAT AGTAATCAAAGCGATGCGACCATATCAGTTCTTTGCTATTACTAAAGTTTTAAAAACGTTAATCAATGAGCTAAATGCTG ATGAAAATATCAACGGTGCTTTAGTAGGATTATTCGATACGGTAGAAGAAGGTATGGATACTAAAGATTTATTAAGTGCA TTATCAGCTCAGTTCGTTAAGGATTCAGCTGGATCAATCGGATTATTATTAGAGGTTGCTCCTGAAAGTGCTTTAAAACT GATTTCAATCTTATCCGATGTGCATCCTGATCAATTAGAACTTCAAGAGATGGATACATTCTTTGATGTTGTAGATGCAA TTGCAGAAGTTAATGACTTAGCTAAGGTTGTTGAACGTGTAAAAAAGTCTACGAAAAGTTTTCAGAAGAGTCTCAAATGG GGCGAGAAAGTTACTCAAGCGACTCTAAGTCCAGTGAACTAA
Upstream 100 bases:
>100_bases AATCGGACAAGCTACAGCTGAATAACAATATAGCCCTACTTATGCTAGTAGGGTTATTTCTATATTTATTTAAATAATTA ATTGAAAAGAGGAATAAAAC
Downstream 100 bases:
>100_bases GTGGTTATGAGCTTGAAGATGCTCTCGTATATAAGCTTGCGCATAAATTAGGTGGAAGGTCAGAAATCATTGATATGCCA CTTGAAGAAGCGTTAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTNEVKVLITQYVNEKGVLKDDSKKEIVIKAMRPYQFFAITKVLKTLINELNADENINGALVGLFDTVEEGMDTKDLLSA LSAQFVKDSAGSIGLLLEVAPESALKLISILSDVHPDQLELQEMDTFFDVVDAIAEVNDLAKVVERVKKSTKSFQKSLKW GEKVTQATLSPVN
Sequences:
>Translated_173_residues MTNEVKVLITQYVNEKGVLKDDSKKEIVIKAMRPYQFFAITKVLKTLINELNADENINGALVGLFDTVEEGMDTKDLLSA LSAQFVKDSAGSIGLLLEVAPESALKLISILSDVHPDQLELQEMDTFFDVVDAIAEVNDLAKVVERVKKSTKSFQKSLKW GEKVTQATLSPVN >Mature_172_residues TNEVKVLITQYVNEKGVLKDDSKKEIVIKAMRPYQFFAITKVLKTLINELNADENINGALVGLFDTVEEGMDTKDLLSAL SAQFVKDSAGSIGLLLEVAPESALKLISILSDVHPDQLELQEMDTFFDVVDAIAEVNDLAKVVERVKKSTKSFQKSLKWG EKVTQATLSPVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19115; Mature: 18984
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEVKVLITQYVNEKGVLKDDSKKEIVIKAMRPYQFFAITKVLKTLINELNADENINGA CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH LVGLFDTVEEGMDTKDLLSALSAQFVKDSAGSIGLLLEVAPESALKLISILSDVHPDQLE HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHH LQEMDTFFDVVDAIAEVNDLAKVVERVKKSTKSFQKSLKWGEKVTQATLSPVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNEVKVLITQYVNEKGVLKDDSKKEIVIKAMRPYQFFAITKVLKTLINELNADENINGA CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH LVGLFDTVEEGMDTKDLLSALSAQFVKDSAGSIGLLLEVAPESALKLISILSDVHPDQLE HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHH LQEMDTFFDVVDAIAEVNDLAKVVERVKKSTKSFQKSLKWGEKVTQATLSPVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA