| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151215
Identifier: 222151215
GI number: 222151215
Start: 1061027
End: 1062031
Strand: Direct
Name: 222151215
Synonym: MCCL_0966
Alternate gene names: NA
Gene position: 1061027-1062031 (Clockwise)
Preceding gene: 222151214
Following gene: 222151216
Centisome position: 50.47
GC content: 36.92
Gene sequence:
>1005_bases ATGGTATTAGAGATTAAAGAATTTGAACAACCGGCATTACAAGCATTTATCGCTGAAGCGCCGATTACTAAAGAACATAG ACTTGCTAAATGTTATCCTGTTGAGCAAGTTGATGAGATTTCAAGCGTATACGACTTAGTGACAAATCAAAAGATTGTTG CAGGTTCTATCGTTGGATTTAATGCAGGTACACCTGTAAGAACTAAAGGAGAAGCGAAACAAGCAGTAGCGAAATTAACT AAAATCGCTCACGCATATCACTTAGATGAAGAAGATATGTTTAAGTTCCGCAATCCACGTAATGACGAAGAGCGTCAGCG CATTATCGATCGTACATTACTAAGCACAGCTGAATTATCTGAAGGTATTGAAGATACTAAAGAATTGATTCGTGCTGAAT TAACATATCGTGGGCGTTTCAACTATGAAGATAAACGTGACAACGTTAAGATTCAGTTTGAATTAGAACGTCCTGATGGA AATGACATGACTGCCACTACAAAATGGGCTGACACTGCTAACTCTACACCATTATCTGATATTGAAGCGGCAATCGCTCA ATTCAAGTTAACAAATGGCAACAAAGCTCCAGATTATATCGTTATGACTGAAGCTACTTATGCATTATTCAAACGTTCTA AACAAGTTAAAGACGAATTATATCGTGATGGATTACAACCTCGTATCATCAAAGATGGTGAAATCGCTGACTTATTCGAG TCAAACGGTTATCCAACTTTAGAAATCGAAAAAGGTTTCACTACTTTAGAAAATGCTGACGGTACAACTTATGATGTTGC ACACTTAGAAGACAACAAATTTGTTTTACATGCTGCGATTATGGGTGCTACGTTAAGTGGTCCTGCTGCTGAAAACAACT TCGCTAAAGGTAAGTTTGCTTATCGAGTAATTTCTCAAGATCCAATCGGAGAAAAAACAATCGTTGGTGAAGTAACATTA CCTGTTTCTAAAAACTTTAATGGAAATGTAATTGTGACTGTCTAA
Upstream 100 bases:
>100_bases TTGAAGAGCGTTGCACAGGTGTAACTGCAAACTTTAAAACAGCAACTCAAGGAAGATTAACGTTTGACGTTTAATCAATA TAAAACTAGGAGGGAATTAA
Downstream 100 bases:
>100_bases TTTAGACAGTCTCTTTTATTAATTAATAGGAGGACTTAAGGATGCCAAAAGTATATGTAGATAAAGGTACTGTAATTCAC AAAGGACAGGCTTATTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MVLEIKEFEQPALQAFIAEAPITKEHRLAKCYPVEQVDEISSVYDLVTNQKIVAGSIVGFNAGTPVRTKGEAKQAVAKLT KIAHAYHLDEEDMFKFRNPRNDEERQRIIDRTLLSTAELSEGIEDTKELIRAELTYRGRFNYEDKRDNVKIQFELERPDG NDMTATTKWADTANSTPLSDIEAAIAQFKLTNGNKAPDYIVMTEATYALFKRSKQVKDELYRDGLQPRIIKDGEIADLFE SNGYPTLEIEKGFTTLENADGTTYDVAHLEDNKFVLHAAIMGATLSGPAAENNFAKGKFAYRVISQDPIGEKTIVGEVTL PVSKNFNGNVIVTV
Sequences:
>Translated_334_residues MVLEIKEFEQPALQAFIAEAPITKEHRLAKCYPVEQVDEISSVYDLVTNQKIVAGSIVGFNAGTPVRTKGEAKQAVAKLT KIAHAYHLDEEDMFKFRNPRNDEERQRIIDRTLLSTAELSEGIEDTKELIRAELTYRGRFNYEDKRDNVKIQFELERPDG NDMTATTKWADTANSTPLSDIEAAIAQFKLTNGNKAPDYIVMTEATYALFKRSKQVKDELYRDGLQPRIIKDGEIADLFE SNGYPTLEIEKGFTTLENADGTTYDVAHLEDNKFVLHAAIMGATLSGPAAENNFAKGKFAYRVISQDPIGEKTIVGEVTL PVSKNFNGNVIVTV >Mature_334_residues MVLEIKEFEQPALQAFIAEAPITKEHRLAKCYPVEQVDEISSVYDLVTNQKIVAGSIVGFNAGTPVRTKGEAKQAVAKLT KIAHAYHLDEEDMFKFRNPRNDEERQRIIDRTLLSTAELSEGIEDTKELIRAELTYRGRFNYEDKRDNVKIQFELERPDG NDMTATTKWADTANSTPLSDIEAAIAQFKLTNGNKAPDYIVMTEATYALFKRSKQVKDELYRDGLQPRIIKDGEIADLFE SNGYPTLEIEKGFTTLENADGTTYDVAHLEDNKFVLHAAIMGATLSGPAAENNFAKGKFAYRVISQDPIGEKTIVGEVTL PVSKNFNGNVIVTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37361; Mature: 37361
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLEIKEFEQPALQAFIAEAPITKEHRLAKCYPVEQVDEISSVYDLVTNQKIVAGSIVGF CEEECHHHCHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEE NAGTPVRTKGEAKQAVAKLTKIAHAYHLDEEDMFKFRNPRNDEERQRIIDRTLLSTAELS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGIEDTKELIRAELTYRGRFNYEDKRDNVKIQFELERPDGNDMTATTKWADTANSTPLSD CCHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHH IEAAIAQFKLTNGNKAPDYIVMTEATYALFKRSKQVKDELYRDGLQPRIIKDGEIADLFE HHHHHHHEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHH SNGYPTLEIEKGFTTLENADGTTYDVAHLEDNKFVLHAAIMGATLSGPAAENNFAKGKFA CCCCCEEEEECCCCEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEE YRVISQDPIGEKTIVGEVTLPVSKNFNGNVIVTV EEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEC >Mature Secondary Structure MVLEIKEFEQPALQAFIAEAPITKEHRLAKCYPVEQVDEISSVYDLVTNQKIVAGSIVGF CEEECHHHCHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEE NAGTPVRTKGEAKQAVAKLTKIAHAYHLDEEDMFKFRNPRNDEERQRIIDRTLLSTAELS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGIEDTKELIRAELTYRGRFNYEDKRDNVKIQFELERPDGNDMTATTKWADTANSTPLSD CCHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHH IEAAIAQFKLTNGNKAPDYIVMTEATYALFKRSKQVKDELYRDGLQPRIIKDGEIADLFE HHHHHHHEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHH SNGYPTLEIEKGFTTLENADGTTYDVAHLEDNKFVLHAAIMGATLSGPAAENNFAKGKFA CCCCCEEEEECCCCEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEE YRVISQDPIGEKTIVGEVTLPVSKNFNGNVIVTV EEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA