| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151211
Identifier: 222151211
GI number: 222151211
Start: 1058128
End: 1059216
Strand: Direct
Name: 222151211
Synonym: MCCL_0962
Alternate gene names: NA
Gene position: 1058128-1059216 (Clockwise)
Preceding gene: 222151210
Following gene: 222151212
Centisome position: 50.33
GC content: 37.01
Gene sequence:
>1089_bases ATGAACGCTGAACAATTAACATTGCTGATTGATGAATTGAAGAAGCACATTGTATCGCTTCTGCATATTACCGATCATTT AAAAGATAGTGATGTACAAAAGACATTACTGACAATCAATAAAATATTTGATGAACTAGGACTTGCTGTTCAAGAGGTAT TACCTGTTGAATTAGCGAAGTCCTATTTTATTGCGATAGATGAAGCTACAGAAGATTTACAAGAGCAAGGCATACAGTTG AATGGTCGAGCAATTGTCGATGGTGTAGTGCAGGCAGACTTTAAGACACAAGCAAACGTTGAAGCGCTATCCAATATCGT TACTGACACGATGCTAGACATGCAAGCAGCAATTAGAACCGCTAAAGAAAACTTTAATAATAGTTATATGCAGACATTAG AAGCAGTCAGAAGTGATATAAGCAAAGGGATCTTAGATGGTAACAATCGTGAAGCAATCATAAAGCGAGTATCAGATACA TTCTTACAAGATGGATTTACTTCGTTTAAGACTGTAGATGGTAAGCAGTTACCTTTGGACTTCTACTCACGTACAGTGGT TAGAACAAAGATGAGGGCAGCAACGAATCATGGTCATCTAATTAGATATGAAGAAGCGGGTGTCAATCTCGTAACGATAA CTGGAAGAGAGCCTACCTGTGGTATATGTGCTAGGTATCGTAACCACGTCTTCAGTATTGACGGAAAAGATAAACGATTC CCACATATCGATGTATACGGACTATTTCCATTGCATCCGAATTGCGAATGCCGTATCAGACCATTTGTAATTGAATATAA AAGTCAGTCTGAGATCAATAAAGCTATTGTTAAAGCAAAGTCATTTAATCCTGATATTGATCCAAGAGCACAAAAACAAA AAGATGCATACAAGCAAGACCAGGATAAGAAACGTATCGCAAGACAAGAAGATAAGCATTACATAAAGATGAAAGCGATA TTAGGAGATAAAGCGCCAAAGAATATTGGTGCATATCGAAATATCAAGCGTAATAATCCAATTAAGTTTGAAGAACTTAA GAAGATGATGAGGGGTGAACCTTATGAAGTTAAGGATAGGGCATATTGA
Upstream 100 bases:
>100_bases GTTCTAAATGGCAATAATACATTGAATAACTTTTTAAACAACAGGCAACCTGATGGAACGCCACTCGATGAACTAGGAAA TCCAATCAAGGAGTGATTAG
Downstream 100 bases:
>100_bases TTATGAAGTAATAGAACAAAAGAAACCTAAGAATGATGATGGAACTGTCTGTGTAGGCATAATTGATTATTTTGACCATG AAATATTATTAATGAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Minor Capsid 2 Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MNAEQLTLLIDELKKHIVSLLHITDHLKDSDVQKTLLTINKIFDELGLAVQEVLPVELAKSYFIAIDEATEDLQEQGIQL NGRAIVDGVVQADFKTQANVEALSNIVTDTMLDMQAAIRTAKENFNNSYMQTLEAVRSDISKGILDGNNREAIIKRVSDT FLQDGFTSFKTVDGKQLPLDFYSRTVVRTKMRAATNHGHLIRYEEAGVNLVTITGREPTCGICARYRNHVFSIDGKDKRF PHIDVYGLFPLHPNCECRIRPFVIEYKSQSEINKAIVKAKSFNPDIDPRAQKQKDAYKQDQDKKRIARQEDKHYIKMKAI LGDKAPKNIGAYRNIKRNNPIKFEELKKMMRGEPYEVKDRAY
Sequences:
>Translated_362_residues MNAEQLTLLIDELKKHIVSLLHITDHLKDSDVQKTLLTINKIFDELGLAVQEVLPVELAKSYFIAIDEATEDLQEQGIQL NGRAIVDGVVQADFKTQANVEALSNIVTDTMLDMQAAIRTAKENFNNSYMQTLEAVRSDISKGILDGNNREAIIKRVSDT FLQDGFTSFKTVDGKQLPLDFYSRTVVRTKMRAATNHGHLIRYEEAGVNLVTITGREPTCGICARYRNHVFSIDGKDKRF PHIDVYGLFPLHPNCECRIRPFVIEYKSQSEINKAIVKAKSFNPDIDPRAQKQKDAYKQDQDKKRIARQEDKHYIKMKAI LGDKAPKNIGAYRNIKRNNPIKFEELKKMMRGEPYEVKDRAY >Mature_362_residues MNAEQLTLLIDELKKHIVSLLHITDHLKDSDVQKTLLTINKIFDELGLAVQEVLPVELAKSYFIAIDEATEDLQEQGIQL NGRAIVDGVVQADFKTQANVEALSNIVTDTMLDMQAAIRTAKENFNNSYMQTLEAVRSDISKGILDGNNREAIIKRVSDT FLQDGFTSFKTVDGKQLPLDFYSRTVVRTKMRAATNHGHLIRYEEAGVNLVTITGREPTCGICARYRNHVFSIDGKDKRF PHIDVYGLFPLHPNCECRIRPFVIEYKSQSEINKAIVKAKSFNPDIDPRAQKQKDAYKQDQDKKRIARQEDKHYIKMKAI LGDKAPKNIGAYRNIKRNNPIKFEELKKMMRGEPYEVKDRAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41360; Mature: 41360
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAEQLTLLIDELKKHIVSLLHITDHLKDSDVQKTLLTINKIFDELGLAVQEVLPVELAK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYFIAIDEATEDLQEQGIQLNGRAIVDGVVQADFKTQANVEALSNIVTDTMLDMQAAIRT HHEEEEHHHHHHHHHCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AKENFNNSYMQTLEAVRSDISKGILDGNNREAIIKRVSDTFLQDGFTSFKTVDGKQLPLD HHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHH FYSRTVVRTKMRAATNHGHLIRYEEAGVNLVTITGREPTCGICARYRNHVFSIDGKDKRF HHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHCCEEEECCCCCCC PHIDVYGLFPLHPNCECRIRPFVIEYKSQSEINKAIVKAKSFNPDIDPRAQKQKDAYKQD CEEEEEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC QDKKRIARQEDKHYIKMKAILGDKAPKNIGAYRNIKRNNPIKFEELKKMMRGEPYEVKDR HHHHHHHHHHHHHHEEHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC AY CC >Mature Secondary Structure MNAEQLTLLIDELKKHIVSLLHITDHLKDSDVQKTLLTINKIFDELGLAVQEVLPVELAK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYFIAIDEATEDLQEQGIQLNGRAIVDGVVQADFKTQANVEALSNIVTDTMLDMQAAIRT HHEEEEHHHHHHHHHCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AKENFNNSYMQTLEAVRSDISKGILDGNNREAIIKRVSDTFLQDGFTSFKTVDGKQLPLD HHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHH FYSRTVVRTKMRAATNHGHLIRYEEAGVNLVTITGREPTCGICARYRNHVFSIDGKDKRF HHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHCCEEEECCCCCCC PHIDVYGLFPLHPNCECRIRPFVIEYKSQSEINKAIVKAKSFNPDIDPRAQKQKDAYKQD CEEEEEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC QDKKRIARQEDKHYIKMKAILGDKAPKNIGAYRNIKRNNPIKFEELKKMMRGEPYEVKDR HHHHHHHHHHHHHHEEHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC AY CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA