| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is 222151175
Identifier: 222151175
GI number: 222151175
Start: 1018196
End: 1019107
Strand: Direct
Name: 222151175
Synonym: MCCL_0926
Alternate gene names: NA
Gene position: 1018196-1019107 (Clockwise)
Preceding gene: 222151174
Following gene: 222151176
Centisome position: 48.43
GC content: 37.94
Gene sequence:
>912_bases ATGACAGTAGAAAATAATTTAGTTGATGTAAAAGCATTAGGAGAAGCGAAATCTATCGACTTTGCTAATAAATTAGGAGT AGGCCTTGATAAGTTATTTCAAGCGCTAAACGTAACGAATAAAATTCCGATGAACGTTGGTTCGGTGTTGAAACAGTATG CGTTCACTGTAGTTGATTCAACAGCGCCAAACGGTGTTGTGGCTGAGGGAGAAGAGATTCCTTTAACTAAAGTTGAACGT AAGCAAGTAGGGATTACAGAACTTACTTTCAAAAAATACGCTAAAGCAACATCTGCTGAAGCTATTCATGCACATGGTTA CGACTTAGCAATCAATCGTACTGATCGTGAATTAATTCGTTATACTCAAAAGAAATTCCGCGCTGACTTCTTCTCAACTC TAAAAGCAGCAATCGAAAATGAATCACGCACAAACGATATCAAAGCATTGACAGCAGAAAATTTACAAGGTGCATTATCA AAAGGACGTGCGAATCTTTCAGTGCTACTTGATGATGAAGTAACACCTATGGCATTCGTAAACCCAAATGACACAGCAGA ACATATGGCAAAAGGTTTAATCAACTCTAACGGCGCACAATTTGGCATGAACTTACTTACTGATTATGTAGGTGTTAAAG TAATTGAATTTGCTGATGTACCAAAAGGCGAAGTATGGATGACAGTATCTGAGAACTTAAATGCAGCATATGCTAATCCA CGCGGAGAGTTATCACGTGCATTCGACTTTGCTACTGATGAAACAGGTTTCGTTGGTGTATTACATGATATTAATTCACG TCGATTAACATCTGAAACAGTTTTAACACATGCAGTAACGTTATTCCCTGAAAACGTTGATGCAGTAATCAAAGTAACAA TTAAGCCTGCTGTAGCTGGTGTGGGAGTATAA
Upstream 100 bases:
>100_bases ATTAACAAAAGCAGATATCTTAGCGATTGAAGATGATCAGCAACGACAAAATGCAATCGCACAAAATAGACACCTTTTTA GGTAACAGGAGGATTTATAT
Downstream 100 bases:
>100_bases GAGTGGTTTAGTTGCTACTCTATTTTATTATAAGGTGGTGGTTATATGTTAGGAAAGCCGATTGTTAATTTTACTGATTT AGTAGAAAATAAGCATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Capsid Protein Fam; Head Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTVENNLVDVKALGEAKSIDFANKLGVGLDKLFQALNVTNKIPMNVGSVLKQYAFTVVDSTAPNGVVAEGEEIPLTKVER KQVGITELTFKKYAKATSAEAIHAHGYDLAINRTDRELIRYTQKKFRADFFSTLKAAIENESRTNDIKALTAENLQGALS KGRANLSVLLDDEVTPMAFVNPNDTAEHMAKGLINSNGAQFGMNLLTDYVGVKVIEFADVPKGEVWMTVSENLNAAYANP RGELSRAFDFATDETGFVGVLHDINSRRLTSETVLTHAVTLFPENVDAVIKVTIKPAVAGVGV
Sequences:
>Translated_303_residues MTVENNLVDVKALGEAKSIDFANKLGVGLDKLFQALNVTNKIPMNVGSVLKQYAFTVVDSTAPNGVVAEGEEIPLTKVER KQVGITELTFKKYAKATSAEAIHAHGYDLAINRTDRELIRYTQKKFRADFFSTLKAAIENESRTNDIKALTAENLQGALS KGRANLSVLLDDEVTPMAFVNPNDTAEHMAKGLINSNGAQFGMNLLTDYVGVKVIEFADVPKGEVWMTVSENLNAAYANP RGELSRAFDFATDETGFVGVLHDINSRRLTSETVLTHAVTLFPENVDAVIKVTIKPAVAGVGV >Mature_302_residues TVENNLVDVKALGEAKSIDFANKLGVGLDKLFQALNVTNKIPMNVGSVLKQYAFTVVDSTAPNGVVAEGEEIPLTKVERK QVGITELTFKKYAKATSAEAIHAHGYDLAINRTDRELIRYTQKKFRADFFSTLKAAIENESRTNDIKALTAENLQGALSK GRANLSVLLDDEVTPMAFVNPNDTAEHMAKGLINSNGAQFGMNLLTDYVGVKVIEFADVPKGEVWMTVSENLNAAYANPR GELSRAFDFATDETGFVGVLHDINSRRLTSETVLTHAVTLFPENVDAVIKVTIKPAVAGVGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32876; Mature: 32745
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVENNLVDVKALGEAKSIDFANKLGVGLDKLFQALNVTNKIPMNVGSVLKQYAFTVVDS CCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEC TAPNGVVAEGEEIPLTKVERKQVGITELTFKKYAKATSAEAIHAHGYDLAINRTDRELIR CCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHH YTQKKFRADFFSTLKAAIENESRTNDIKALTAENLQGALSKGRANLSVLLDDEVTPMAFV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEE NPNDTAEHMAKGLINSNGAQFGMNLLTDYVGVKVIEFADVPKGEVWMTVSENLNAAYANP CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCEEECCC RGELSRAFDFATDETGFVGVLHDINSRRLTSETVLTHAVTLFPENVDAVIKVTIKPAVAG CHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCCEEEEEEEECCCCC VGV CCC >Mature Secondary Structure TVENNLVDVKALGEAKSIDFANKLGVGLDKLFQALNVTNKIPMNVGSVLKQYAFTVVDS CCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEC TAPNGVVAEGEEIPLTKVERKQVGITELTFKKYAKATSAEAIHAHGYDLAINRTDRELIR CCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHH YTQKKFRADFFSTLKAAIENESRTNDIKALTAENLQGALSKGRANLSVLLDDEVTPMAFV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEE NPNDTAEHMAKGLINSNGAQFGMNLLTDYVGVKVIEFADVPKGEVWMTVSENLNAAYANP CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCEEECCC RGELSRAFDFATDETGFVGVLHDINSRRLTSETVLTHAVTLFPENVDAVIKVTIKPAVAG CHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCCEEEEEEEECCCCC VGV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA