| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151162
Identifier: 222151162
GI number: 222151162
Start: 1006851
End: 1007741
Strand: Direct
Name: 222151162
Synonym: MCCL_0913
Alternate gene names: NA
Gene position: 1006851-1007741 (Clockwise)
Preceding gene: 222151161
Following gene: 222151163
Centisome position: 47.89
GC content: 32.44
Gene sequence:
>891_bases ATGGCTGGGTGGATTAGTCTTCATCGCTCTATTGAAAAACATTGGTTATACGAAGAAGAGAGAAAGTTTTCGAGATTTGA AGCATGGGTTGATTTATTGTTAATGGTCAATCATGCAGATAACAAAACAATGATTGATGGAAAACTAGTCACAGTTAAAC GTGGCCAGAGAATCACCTCTCTTAGAAAACTAGGTGACAGGTGGAACTGGTCATTAACCAAAGTAGATGCATTTTTAAAG TTGTTAGAAGAAGATAAAATGATTGTCTTAAAAAAAGACACTAAAAAAACACTTGTAACCATTGTCAATTATGACATCTA TCAAAATAATGATTTAGAAAAAAGACACAGAAAAGACAGTGAAAAGACAGTCAAAGAACACAGAAAAGACAGTGAAAAGA CACAGAAAAAAACAAACAATAATGTTAATAAAGATAATAATGTAAATAATGATAATAAAGTAATAAGTAGTAGTAACAAC GACGACTTCAGAACAGTTGTGAGCATGTATCAAGAGAATATCGAACTCAATCCTGCACCTGTGACATTCCAGAAAATACA ACAAGACTTTAGTGATTACGGTAAAGACATCATGATATATGCGATTAAAAAATCAGCACTTAAAAATAATCACAACTACT CATTCATTAATTACTTATTAAACGACTGGAAGAAGAAGCAGCTAACGACAGTTGATGAAATTAAACAGAGCGAACATAAC TTCGAGTTTAAAAAGCAAGCAACTTATTCTAAGCAGAATCAACAAAAAGAAATAACACCGTCCTGGATTAATCAGGAAAA TACTCAAAAACAAGACATCGATGAAGAAGAACTTGAAAGAGAACGTCAGAAGTTACTCGAAGAATTGAATAGCAGTTGGG AGAATTCTTAA
Upstream 100 bases:
>100_bases ACAGGACAGAATAATAATCCTTTTGCTAATAGTGGACCAATCGATATTAGTGATGATGATCTACCGTTCTAATTCATTCA GCTAAGAAAGAGGTGATTAA
Downstream 100 bases:
>100_bases ATGATTAAATTCTTAGAGTATCGAAAGTGGATTCAATTATTTAATAAATACAGATTCAGTAATTGGGAGACGAGCGACAA TAACAGCATCATGTTCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: DNAD Domain Containing Protein; Replication Protein O; DNAD Domain-Containing Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAGWISLHRSIEKHWLYEEERKFSRFEAWVDLLLMVNHADNKTMIDGKLVTVKRGQRITSLRKLGDRWNWSLTKVDAFLK LLEEDKMIVLKKDTKKTLVTIVNYDIYQNNDLEKRHRKDSEKTVKEHRKDSEKTQKKTNNNVNKDNNVNNDNKVISSSNN DDFRTVVSMYQENIELNPAPVTFQKIQQDFSDYGKDIMIYAIKKSALKNNHNYSFINYLLNDWKKKQLTTVDEIKQSEHN FEFKKQATYSKQNQQKEITPSWINQENTQKQDIDEEELERERQKLLEELNSSWENS
Sequences:
>Translated_296_residues MAGWISLHRSIEKHWLYEEERKFSRFEAWVDLLLMVNHADNKTMIDGKLVTVKRGQRITSLRKLGDRWNWSLTKVDAFLK LLEEDKMIVLKKDTKKTLVTIVNYDIYQNNDLEKRHRKDSEKTVKEHRKDSEKTQKKTNNNVNKDNNVNNDNKVISSSNN DDFRTVVSMYQENIELNPAPVTFQKIQQDFSDYGKDIMIYAIKKSALKNNHNYSFINYLLNDWKKKQLTTVDEIKQSEHN FEFKKQATYSKQNQQKEITPSWINQENTQKQDIDEEELERERQKLLEELNSSWENS >Mature_295_residues AGWISLHRSIEKHWLYEEERKFSRFEAWVDLLLMVNHADNKTMIDGKLVTVKRGQRITSLRKLGDRWNWSLTKVDAFLKL LEEDKMIVLKKDTKKTLVTIVNYDIYQNNDLEKRHRKDSEKTVKEHRKDSEKTQKKTNNNVNKDNNVNNDNKVISSSNND DFRTVVSMYQENIELNPAPVTFQKIQQDFSDYGKDIMIYAIKKSALKNNHNYSFINYLLNDWKKKQLTTVDEIKQSEHNF EFKKQATYSKQNQQKEITPSWINQENTQKQDIDEEELERERQKLLEELNSSWENS
Specific function: Unknown
COG id: COG3935
COG function: function code L; Putative primosome component and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35384; Mature: 35253
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWISLHRSIEKHWLYEEERKFSRFEAWVDLLLMVNHADNKTMIDGKLVTVKRGQRITS CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHH LRKLGDRWNWSLTKVDAFLKLLEEDKMIVLKKDTKKTLVTIVNYDIYQNNDLEKRHRKDS HHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHEEHEEEEEEECCCCHHHHHCCCH EKTVKEHRKDSEKTQKKTNNNVNKDNNVNNDNKVISSSNNDDFRTVVSMYQENIELNPAP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCC VTFQKIQQDFSDYGKDIMIYAIKKSALKNNHNYSFINYLLNDWKKKQLTTVDEIKQSEHN CHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC FEFKKQATYSKQNQQKEITPSWINQENTQKQDIDEEELERERQKLLEELNSSWENS CCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGWISLHRSIEKHWLYEEERKFSRFEAWVDLLLMVNHADNKTMIDGKLVTVKRGQRITS CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHH LRKLGDRWNWSLTKVDAFLKLLEEDKMIVLKKDTKKTLVTIVNYDIYQNNDLEKRHRKDS HHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHEEHEEEEEEECCCCHHHHHCCCH EKTVKEHRKDSEKTQKKTNNNVNKDNNVNNDNKVISSSNNDDFRTVVSMYQENIELNPAP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCC VTFQKIQQDFSDYGKDIMIYAIKKSALKNNHNYSFINYLLNDWKKKQLTTVDEIKQSEHN CHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC FEFKKQATYSKQNQQKEITPSWINQENTQKQDIDEEELERERQKLLEELNSSWENS CCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA