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The map label for this gene is ynbA [H]

Identifier: 222151146

GI number: 222151146

Start: 991242

End: 992519

Strand: Direct

Name: ynbA [H]

Synonym: MCCL_0897

Alternate gene names: 222151146

Gene position: 991242-992519 (Clockwise)

Preceding gene: 222151144

Following gene: 222151147

Centisome position: 47.15

GC content: 35.84

Gene sequence:

>1278_bases
TTGAAAGATACACAAAAAGCGACTGAACGTGCTCTTATTATAGCAGTTCATCTAAAAAAGAACGATGATTTTAACTTCGG
TGAATCGTTAGAGGAGATTAAATCATTGTGCCATACAGCCGGCATTGAAGTTACCGAAGTTGTTATTCAAAATAAAGATA
GAGTTGATAATAGTTATTACATAGGTAAAGGAAAGCTAGAAGAAATAGTGGAACTAAAGGAACGAGAAGATATAGCATTT
GATATGGTTGTTGTTAATAATGAGCTCACAACAAGTCAATCGAAACATTTAAATGAAGTGCTTGACTGTAAAATAATAGA
CCGTACTCAGCTTATACTGGATATCTTTGCACAACGTGCAAAAAGTCGAGAAGGTAAACTACAGGTGGAGCTTGCTCAGC
TCGAGTATTTATTGCCAAGATTATCTGGACACGGACTAAGTTTATCAAGACTTGGTGGTGGTATCGGGACACGTGGGCCT
GGTGAAACGAAACTAGAAATGAATAGGCGACATATCAGAAGCAGAATTCATGATATCAAGCTACAACTCGAAACAATTAA
ACAACATCGACAGCGTTATAGAGAAAACCGAAAAAAGAGAAATATATTCCAGGTTGCGCTAGTTGGCTATACGAATGCAG
GCAAATCGACGTGGTTTAATGCACTTTCAGACAGTGACACATATATGGAAGATTTACTGTTTGCGACGCTTGACCCGAAG
AGTAAGATGATGAAGCTGCATGAAGGTTATCCAGTACTATTAAGTGATACCGTCGGTTTTATACAGCAGTTGCCGACTCA
TTTAATCGAAGCATTCAGTTCGACATTAGAAGAGGCGAAGTATGCAGATATTCTTATTCATGTCGTTGATAGAAGTCATC
CAAACTATATGAATCATATCGATACAGTCATTGCTCTGTTAAAGGAGCTAGATATGGATACAATTCCGGTACTTACGCTT
TTAAATAAAAAAGATAAGCTTGAATCCTTTGTCACAGCTGCAGGGAAAGATGAATTGCTTGTATCAGTATTTGATAAACA
AGATAAGATACATATACAAAACAAACTTATTGATATGATGCAACGTAATATGTCAAAATACGCAATTGAAGTTGACAAGG
ATGCCGGACAGATAATCGCTTTCTTAAAGGAACATACACTAGTTTCAGCAATAAATTTTAATGAAGACAAAGATAAATAT
GAAATATACGGCTATGAACATCGTCATGAAGGTATATTAAATAAGCTATTAAGTAATGAACAGATAAAGAGGTTATAA

Upstream 100 bases:

>100_bases
TTCATGATTTGCTTTAGTAACCGTATATTCGTATATAGACATATAAACGCATCCTTTCTAAATATGTTAAAATGAAGTAT
CAAATAATTGAGGTGAAAAT

Downstream 100 bases:

>100_bases
TACTATGAAAATTACGAAGTATGAACAGCTCCAGCAATTAATCGAGGACAATGAAAGCAAAATCACGCCGATATTTAAAA
GGATAGAATCTATCGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKDTQKATERALIIAVHLKKNDDFNFGESLEEIKSLCHTAGIEVTEVVIQNKDRVDNSYYIGKGKLEEIVELKEREDIAF
DMVVVNNELTTSQSKHLNEVLDCKIIDRTQLILDIFAQRAKSREGKLQVELAQLEYLLPRLSGHGLSLSRLGGGIGTRGP
GETKLEMNRRHIRSRIHDIKLQLETIKQHRQRYRENRKKRNIFQVALVGYTNAGKSTWFNALSDSDTYMEDLLFATLDPK
SKMMKLHEGYPVLLSDTVGFIQQLPTHLIEAFSSTLEEAKYADILIHVVDRSHPNYMNHIDTVIALLKELDMDTIPVLTL
LNKKDKLESFVTAAGKDELLVSVFDKQDKIHIQNKLIDMMQRNMSKYAIEVDKDAGQIIAFLKEHTLVSAINFNEDKDKY
EIYGYEHRHEGILNKLLSNEQIKRL

Sequences:

>Translated_425_residues
MKDTQKATERALIIAVHLKKNDDFNFGESLEEIKSLCHTAGIEVTEVVIQNKDRVDNSYYIGKGKLEEIVELKEREDIAF
DMVVVNNELTTSQSKHLNEVLDCKIIDRTQLILDIFAQRAKSREGKLQVELAQLEYLLPRLSGHGLSLSRLGGGIGTRGP
GETKLEMNRRHIRSRIHDIKLQLETIKQHRQRYRENRKKRNIFQVALVGYTNAGKSTWFNALSDSDTYMEDLLFATLDPK
SKMMKLHEGYPVLLSDTVGFIQQLPTHLIEAFSSTLEEAKYADILIHVVDRSHPNYMNHIDTVIALLKELDMDTIPVLTL
LNKKDKLESFVTAAGKDELLVSVFDKQDKIHIQNKLIDMMQRNMSKYAIEVDKDAGQIIAFLKEHTLVSAINFNEDKDKY
EIYGYEHRHEGILNKLLSNEQIKRL
>Mature_425_residues
MKDTQKATERALIIAVHLKKNDDFNFGESLEEIKSLCHTAGIEVTEVVIQNKDRVDNSYYIGKGKLEEIVELKEREDIAF
DMVVVNNELTTSQSKHLNEVLDCKIIDRTQLILDIFAQRAKSREGKLQVELAQLEYLLPRLSGHGLSLSRLGGGIGTRGP
GETKLEMNRRHIRSRIHDIKLQLETIKQHRQRYRENRKKRNIFQVALVGYTNAGKSTWFNALSDSDTYMEDLLFATLDPK
SKMMKLHEGYPVLLSDTVGFIQQLPTHLIEAFSSTLEEAKYADILIHVVDRSHPNYMNHIDTVIALLKELDMDTIPVLTL
LNKKDKLESFVTAAGKDELLVSVFDKQDKIHIQNKLIDMMQRNMSKYAIEVDKDAGQIIAFLKEHTLVSAINFNEDKDKY
EIYGYEHRHEGILNKLLSNEQIKRL

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133116, Length=169, Percent_Identity=36.094674556213, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI310124269, Length=161, Percent_Identity=36.6459627329193, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI310124267, Length=161, Percent_Identity=36.6459627329193, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI310124171, Length=161, Percent_Identity=36.6459627329193, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI310124169, Length=161, Percent_Identity=36.6459627329193, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI310133118, Length=185, Percent_Identity=35.1351351351351, Blast_Score=104, Evalue=1e-22,
Organism=Escherichia coli, GI1790615, Length=338, Percent_Identity=41.4201183431953, Blast_Score=264, Evalue=9e-72,
Organism=Caenorhabditis elegans, GI17561038, Length=318, Percent_Identity=31.1320754716981, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24650079, Length=319, Percent_Identity=29.4670846394984, Blast_Score=115, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 48844; Mature: 48844

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTQKATERALIIAVHLKKNDDFNFGESLEEIKSLCHTAGIEVTEVVIQNKDRVDNSYY
CCCHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEE
IGKGKLEEIVELKEREDIAFDMVVVNNELTTSQSKHLNEVLDCKIIDRTQLILDIFAQRA
ECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCEECHHHHHHHHHHHHHH
KSREGKLQVELAQLEYLLPRLSGHGLSLSRLGGGIGTRGPGETKLEMNRRHIRSRIHDIK
CCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LQLETIKQHRQRYRENRKKRNIFQVALVGYTNAGKSTWFNALSDSDTYMEDLLFATLDPK
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCH
SKMMKLHEGYPVLLSDTVGFIQQLPTHLIEAFSSTLEEAKYADILIHVVDRSHPNYMNHI
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DTVIALLKELDMDTIPVLTLLNKKDKLESFVTAAGKDELLVSVFDKQDKIHIQNKLIDMM
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
QRNMSKYAIEVDKDAGQIIAFLKEHTLVSAINFNEDKDKYEIYGYEHRHEGILNKLLSNE
HHCHHHEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCH
QIKRL
HHHCC
>Mature Secondary Structure
MKDTQKATERALIIAVHLKKNDDFNFGESLEEIKSLCHTAGIEVTEVVIQNKDRVDNSYY
CCCHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEE
IGKGKLEEIVELKEREDIAFDMVVVNNELTTSQSKHLNEVLDCKIIDRTQLILDIFAQRA
ECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCEECHHHHHHHHHHHHHH
KSREGKLQVELAQLEYLLPRLSGHGLSLSRLGGGIGTRGPGETKLEMNRRHIRSRIHDIK
CCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LQLETIKQHRQRYRENRKKRNIFQVALVGYTNAGKSTWFNALSDSDTYMEDLLFATLDPK
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCH
SKMMKLHEGYPVLLSDTVGFIQQLPTHLIEAFSSTLEEAKYADILIHVVDRSHPNYMNHI
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DTVIALLKELDMDTIPVLTLLNKKDKLESFVTAAGKDELLVSVFDKQDKIHIQNKLIDMM
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
QRNMSKYAIEVDKDAGQIIAFLKEHTLVSAINFNEDKDKYEIYGYEHRHEGILNKLLSNE
HHCHHHEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCH
QIKRL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]