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The map label for this gene is tsf

Identifier: 222151090

GI number: 222151090

Start: 917768

End: 918649

Strand: Direct

Name: tsf

Synonym: MCCL_0841

Alternate gene names: 222151090

Gene position: 917768-918649 (Clockwise)

Preceding gene: 222151089

Following gene: 222151091

Centisome position: 43.65

GC content: 36.73

Gene sequence:

>882_bases
ATGGCTATTACAGCACAATTAGTTAAACAATTACGTGAAAGAACAGGCGCAGGTATGATGGACTGCAAAAAAGCATTAAC
TGAAACAAATGGAGATATCGACGCAGCCGTTGACTACTTACGTGAAAAAGGGATTGCAAAAGCTGCTAAAAAAGCTGACC
GTATCGCTGCTGAAGGTACAACTTATGTTGCTTCTAGTGGCAACACTGCAGTTTTATTAGAGTTAAACTCTGAAACAGAT
TTCGTTGCACGTAATGAAGGTTTCCAAGCATTAGTTAAAGAAATGGCAGATCATATTTTAGCAACTAAACCAGCTGATCT
TGATGCTTTAATGGCGTCTGAAATCGAAACTGGTAAAACTGTTGAAACTAAATTGAACGAAGCAATTTCTACAATCGGTG
AGAAATTAACTTTACGTCGTTTCGTATTAGCTGAAAAAACAGATGCAGATGCATTTGGAGAATACTTACACATGGGTGGA
CGTATTGGCGTATTAGCAGTAGTTGAAAATTCAACTGATGCTGAAGCTGCAAAAGACGTTGCAATGCACATCGCTGCATT
AAATCCTAAGTTCGTTTCTCGCGAACAAGTTTCTGCTGAAGAATTAGAACATGAAAAAGAAATTTTAAAACAACAAGCAT
TAAATGAAGGTAAACCAGAAAATATCGTTGAAAAAATGGTTGAAGGTCGTCTACGTAAATATTTAGAAGAAATTTGTGCG
GTTGATCAGCCATTCGTTAAAAATCCAGATCAAACTGTTGCTGAATTCTTAAAATCAAAAGGTGGTTCATTAAAATCATT
CGTACGTTATGAAGTTGGGGAAGGTATCGAGAAACGTCAAGATAACTTTGCTGACGAAGTAATGGGTCAAATGGGTAAAT
AA

Upstream 100 bases:

>100_bases
ACATTTATCACTTTTTTTAAAAGCTAAAGCATTTGCTTTAGTTTTAATTAAAATTTTAGTAAAATAAAACCGTACACATA
AATCTCTGGAGGTATTATAC

Downstream 100 bases:

>100_bases
TGTTCTGATAAAGACACTTCGGTGTCTTTTTTTATACATAAAAGGTTAGAAAAACTACATATAATGATTTATTTAACAGA
AGATTATTGATATAATGGCT

Product: elongation factor EF-Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAITAQLVKQLRERTGAGMMDCKKALTETNGDIDAAVDYLREKGIAKAAKKADRIAAEGTTYVASSGNTAVLLELNSETD
FVARNEGFQALVKEMADHILATKPADLDALMASEIETGKTVETKLNEAISTIGEKLTLRRFVLAEKTDADAFGEYLHMGG
RIGVLAVVENSTDAEAAKDVAMHIAALNPKFVSREQVSAEELEHEKEILKQQALNEGKPENIVEKMVEGRLRKYLEEICA
VDQPFVKNPDQTVAEFLKSKGGSLKSFVRYEVGEGIEKRQDNFADEVMGQMGK

Sequences:

>Translated_293_residues
MAITAQLVKQLRERTGAGMMDCKKALTETNGDIDAAVDYLREKGIAKAAKKADRIAAEGTTYVASSGNTAVLLELNSETD
FVARNEGFQALVKEMADHILATKPADLDALMASEIETGKTVETKLNEAISTIGEKLTLRRFVLAEKTDADAFGEYLHMGG
RIGVLAVVENSTDAEAAKDVAMHIAALNPKFVSREQVSAEELEHEKEILKQQALNEGKPENIVEKMVEGRLRKYLEEICA
VDQPFVKNPDQTVAEFLKSKGGSLKSFVRYEVGEGIEKRQDNFADEVMGQMGK
>Mature_292_residues
AITAQLVKQLRERTGAGMMDCKKALTETNGDIDAAVDYLREKGIAKAAKKADRIAAEGTTYVASSGNTAVLLELNSETDF
VARNEGFQALVKEMADHILATKPADLDALMASEIETGKTVETKLNEAISTIGEKLTLRRFVLAEKTDADAFGEYLHMGGR
IGVLAVVENSTDAEAAKDVAMHIAALNPKFVSREQVSAEELEHEKEILKQQALNEGKPENIVEKMVEGRLRKYLEEICAV
DQPFVKNPDQTVAEFLKSKGGSLKSFVRYEVGEGIEKRQDNFADEVMGQMGK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=303, Percent_Identity=27.3927392739274, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI291084500, Length=324, Percent_Identity=26.2345679012346, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI291084498, Length=99, Percent_Identity=42.4242424242424, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI291084502, Length=99, Percent_Identity=42.4242424242424, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=46.3157894736842, Blast_Score=241, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI17561440, Length=305, Percent_Identity=28.8524590163934, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI19921466, Length=284, Percent_Identity=29.9295774647887, Blast_Score=97, Evalue=9e-21,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_MACCJ (B9EBD7)

Other databases:

- EMBL:   AP009484
- RefSeq:   YP_002560244.1
- GeneID:   7389548
- GenomeReviews:   AP009484_GR
- KEGG:   mcl:MCCL_0841
- OMA:   YLHGTRI
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32056; Mature: 31925

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITAQLVKQLRERTGAGMMDCKKALTETNGDIDAAVDYLREKGIAKAAKKADRIAAEGT
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TYVASSGNTAVLLELNSETDFVARNEGFQALVKEMADHILATKPADLDALMASEIETGKT
EEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
VETKLNEAISTIGEKLTLRRFVLAEKTDADAFGEYLHMGGRIGVLAVVENSTDAEAAKDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHH
AMHIAALNPKFVSREQVSAEELEHEKEILKQQALNEGKPENIVEKMVEGRLRKYLEEICA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
VDQPFVKNPDQTVAEFLKSKGGSLKSFVRYEVGEGIEKRQDNFADEVMGQMGK
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AITAQLVKQLRERTGAGMMDCKKALTETNGDIDAAVDYLREKGIAKAAKKADRIAAEGT
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TYVASSGNTAVLLELNSETDFVARNEGFQALVKEMADHILATKPADLDALMASEIETGKT
EEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
VETKLNEAISTIGEKLTLRRFVLAEKTDADAFGEYLHMGGRIGVLAVVENSTDAEAAKDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHH
AMHIAALNPKFVSREQVSAEELEHEKEILKQQALNEGKPENIVEKMVEGRLRKYLEEICA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
VDQPFVKNPDQTVAEFLKSKGGSLKSFVRYEVGEGIEKRQDNFADEVMGQMGK
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA