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The map label for this gene is fabD [H]

Identifier: 222151064

GI number: 222151064

Start: 886169

End: 887065

Strand: Direct

Name: fabD [H]

Synonym: MCCL_0815

Alternate gene names: 222151064

Gene position: 886169-887065 (Clockwise)

Preceding gene: 222151063

Following gene: 222151065

Centisome position: 42.15

GC content: 40.69

Gene sequence:

>897_bases
ATGAGTAAGCGAGCGCTACTATTTCCGGGACAAGGATCACAGTTCGTTGGTATGACCGACGATTTTAACGAGCGAGGGCA
AAAGACGCTTGAACAATTGAATCATCTGTTTGATGTCGACCTCGTGCATATTATGCAACATGATGAAGCGGTTAATGATA
CGAAGTATACACAGCCGGCAATTGTAATGCATAGCGTAGTATTGTTAGAGCAAATTCAACAGCCATTCGATTATTGTCTG
GGTCATAGTCTGGGAGAATACAGTGCACTAGTCGCATCAGGTGTTTTAACAAAAGAGGATGCTGTTCAAATTGTCTACAA
ACGTGGTCAGTTAATGAGTGAAGCATATCCGCAAGGTGTGGGGAAGATGGCGGCAGTTATTGGAACAGATCGATTGGTTA
TAGAAAAAGCTTGCGAAGCTGTTAGCAGTGAAGACCATCTATTAAACGTTGCGAATATTAATGGTCCAGGACAGATTGTC
GTGTCTGGTCATGCACAGTGTATAGAAGCGCTCATCGACAGAAAACATGAACTCGGCCTAAAGAAAATCATTCCGCTCAA
TGTCAGTGGTCCATTTCATTCAGAGCTTATGAAAGTCATCGAAGAAGAATTCAGGGCGTATCTTGAGCAGTTTGATTTTC
AAGAAGCACAAATTCCTGTTGTGCAAAATGTAAATGCATTACCTGAAATTGATGCGAAGCGCATCAAGGAGAACTTAGTA
AGACAATTATATTCTCCGGTGGAATTTACAGATTCCATACGTTATCTGATTGACCAAGGAGTCACTGAGTTTGTTGAAAT
CGGGCCTAAAAAGGTGCTTACTGCACTCGTAAAGAAAATAGAACGTAATATCCCTGTTAGAAATATTACTACTACAAATG
AAATAAGTGAGGTTTAA

Upstream 100 bases:

>100_bases
CACGGTTCAAGCGATAAGAAAGCATTCTTCAATGCGCTTAAACAAGTACGACAATCAGCAAGAGAAGATGTTATATCATT
GTTAAAACAAGAGGTGACAC

Downstream 100 bases:

>100_bases
TATGAAGACGGCTTTAGTTACGGGAAGTTCCAGAGGTATCGGCAGAAGTATTGCTTTAGCTCTGGCAGACGAAGGATTTA
ATATTATCGTCAATTATTCA

Product: malonyl CoA-acyl carrier protein transacylase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSKRALLFPGQGSQFVGMTDDFNERGQKTLEQLNHLFDVDLVHIMQHDEAVNDTKYTQPAIVMHSVVLLEQIQQPFDYCL
GHSLGEYSALVASGVLTKEDAVQIVYKRGQLMSEAYPQGVGKMAAVIGTDRLVIEKACEAVSSEDHLLNVANINGPGQIV
VSGHAQCIEALIDRKHELGLKKIIPLNVSGPFHSELMKVIEEEFRAYLEQFDFQEAQIPVVQNVNALPEIDAKRIKENLV
RQLYSPVEFTDSIRYLIDQGVTEFVEIGPKKVLTALVKKIERNIPVRNITTTNEISEV

Sequences:

>Translated_298_residues
MSKRALLFPGQGSQFVGMTDDFNERGQKTLEQLNHLFDVDLVHIMQHDEAVNDTKYTQPAIVMHSVVLLEQIQQPFDYCL
GHSLGEYSALVASGVLTKEDAVQIVYKRGQLMSEAYPQGVGKMAAVIGTDRLVIEKACEAVSSEDHLLNVANINGPGQIV
VSGHAQCIEALIDRKHELGLKKIIPLNVSGPFHSELMKVIEEEFRAYLEQFDFQEAQIPVVQNVNALPEIDAKRIKENLV
RQLYSPVEFTDSIRYLIDQGVTEFVEIGPKKVLTALVKKIERNIPVRNITTTNEISEV
>Mature_297_residues
SKRALLFPGQGSQFVGMTDDFNERGQKTLEQLNHLFDVDLVHIMQHDEAVNDTKYTQPAIVMHSVVLLEQIQQPFDYCLG
HSLGEYSALVASGVLTKEDAVQIVYKRGQLMSEAYPQGVGKMAAVIGTDRLVIEKACEAVSSEDHLLNVANINGPGQIVV
SGHAQCIEALIDRKHELGLKKIIPLNVSGPFHSELMKVIEEEFRAYLEQFDFQEAQIPVVQNVNALPEIDAKRIKENLVR
QLYSPVEFTDSIRYLIDQGVTEFVEIGPKKVLTALVKKIERNIPVRNITTTNEISEV

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=300, Percent_Identity=28.6666666666667, Blast_Score=104, Evalue=8e-23,
Organism=Escherichia coli, GI1787334, Length=289, Percent_Identity=41.1764705882353, Blast_Score=207, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17550940, Length=295, Percent_Identity=27.1186440677966, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71984332, Length=293, Percent_Identity=25.938566552901, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24665753, Length=297, Percent_Identity=29.96632996633, Blast_Score=114, Evalue=9e-26,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 33338; Mature: 33207

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRALLFPGQGSQFVGMTDDFNERGQKTLEQLNHLFDVDLVHIMQHDEAVNDTKYTQPA
CCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
IVMHSVVLLEQIQQPFDYCLGHSLGEYSALVASGVLTKEDAVQIVYKRGQLMSEAYPQGV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GKMAAVIGTDRLVIEKACEAVSSEDHLLNVANINGPGQIVVSGHAQCIEALIDRKHELGL
HHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCC
KKIIPLNVSGPFHSELMKVIEEEFRAYLEQFDFQEAQIPVVQNVNALPEIDAKRIKENLV
HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
RQLYSPVEFTDSIRYLIDQGVTEFVEIGPKKVLTALVKKIERNIPVRNITTTNEISEV
HHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SKRALLFPGQGSQFVGMTDDFNERGQKTLEQLNHLFDVDLVHIMQHDEAVNDTKYTQPA
CCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
IVMHSVVLLEQIQQPFDYCLGHSLGEYSALVASGVLTKEDAVQIVYKRGQLMSEAYPQGV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GKMAAVIGTDRLVIEKACEAVSSEDHLLNVANINGPGQIVVSGHAQCIEALIDRKHELGL
HHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCC
KKIIPLNVSGPFHSELMKVIEEEFRAYLEQFDFQEAQIPVVQNVNALPEIDAKRIKENLV
HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
RQLYSPVEFTDSIRYLIDQGVTEFVEIGPKKVLTALVKKIERNIPVRNITTTNEISEV
HHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA