| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is mraW
Identifier: 222151001
GI number: 222151001
Start: 809423
End: 810355
Strand: Direct
Name: mraW
Synonym: MCCL_0751
Alternate gene names: 222151001
Gene position: 809423-810355 (Clockwise)
Preceding gene: 222151000
Following gene: 222151002
Centisome position: 38.5
GC content: 39.66
Gene sequence:
>933_bases ATGTTCCATCATGTAACAGTATTATTAGAAGAAACGGTCGATCAGCTGAATATTGATCCAAATGGGATATACGTCGACTG TACGTTAGGTGGAGCAGGACACAGTCTATATCTTGTGAAGCAGTTGCAGGAAGGGCACCTCATATCGATTGATCAGGATC AGACTGCGATTGATAACGCGCACATCATACTAAAAGATTATCTGGATAAGGTAACGTTTGTTAAGGATAATTTTCGTAAT CTTTCTGATATCCTTGCACATCTTGATATTCAGAAGGTTGACGGGATTTTATATGATCTAGGAGTATCAAGTCCACAGCT GGATGTAGGAGAACGTGGTTTCAGCTATCATCAAGAAGCTAAACTTGATATGCGCATGGACCAGACACAGACACTATCAG CTTATGAAGTGGTCAATACATGGCCATACGAAAAGCTTGTTTCTATATTTTTCCGTTATGGTGAAGAGAAATTTTCTAAA CAAATTGCAAGAAAGATTGAAGCTGAACGTGAGTTAAAGCCAATCGAAACAACGACTGAACTAGTTGAAATTATTAAAGC AGCAATTCCGGCACCCGCAAGAAGAACAGGAGGACATCCCGCTAAGCGTGTCTTCCAGGCGATAAGAATTGCTGTCAATG ATGAATTAGGTGCCTTTGAATCATCGATAGAGCAAGCAATTGATAGTGTTAAGCCGGGTGGTAGAATTTCAGTGATAACA TTCCATTCTTTAGAAGACCGTTTATGTAAACAGGTCTTTCAGGAATACAGTAAAGGACCAGATATCCCTCGTGGATTACC GGTCGTTCCCCCTGAATACCAGCCGAAACTAAAGAAAATCACTAGAAAACCAATTACATCCTCAAATGAAGAGCTCGAAC ATAATAATAGAGCGAGAAGTGCAAAGCTTAGAGTCGTAGAAATTTTAAAATAA
Upstream 100 bases:
>100_bases TTGGGATCGCAAGTTATGGTCTGATTTCTACGAAGAGACAGAAGAAGAATTTGAAACAATTGCAGAAGAATTAATTGATT TTGATTTTTAGGAGGATTCT
Downstream 100 bases:
>100_bases AGAGGTGACAACATGGCAGTAGAGTATATCAATCCGAACTATTACAATCAGGTCAATGAACAAGTTAAAGTTAAATCTGT TCCAAAAACACATGTTGTTT
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MFHHVTVLLEETVDQLNIDPNGIYVDCTLGGAGHSLYLVKQLQEGHLISIDQDQTAIDNAHIILKDYLDKVTFVKDNFRN LSDILAHLDIQKVDGILYDLGVSSPQLDVGERGFSYHQEAKLDMRMDQTQTLSAYEVVNTWPYEKLVSIFFRYGEEKFSK QIARKIEAERELKPIETTTELVEIIKAAIPAPARRTGGHPAKRVFQAIRIAVNDELGAFESSIEQAIDSVKPGGRISVIT FHSLEDRLCKQVFQEYSKGPDIPRGLPVVPPEYQPKLKKITRKPITSSNEELEHNNRARSAKLRVVEILK
Sequences:
>Translated_310_residues MFHHVTVLLEETVDQLNIDPNGIYVDCTLGGAGHSLYLVKQLQEGHLISIDQDQTAIDNAHIILKDYLDKVTFVKDNFRN LSDILAHLDIQKVDGILYDLGVSSPQLDVGERGFSYHQEAKLDMRMDQTQTLSAYEVVNTWPYEKLVSIFFRYGEEKFSK QIARKIEAERELKPIETTTELVEIIKAAIPAPARRTGGHPAKRVFQAIRIAVNDELGAFESSIEQAIDSVKPGGRISVIT FHSLEDRLCKQVFQEYSKGPDIPRGLPVVPPEYQPKLKKITRKPITSSNEELEHNNRARSAKLRVVEILK >Mature_310_residues MFHHVTVLLEETVDQLNIDPNGIYVDCTLGGAGHSLYLVKQLQEGHLISIDQDQTAIDNAHIILKDYLDKVTFVKDNFRN LSDILAHLDIQKVDGILYDLGVSSPQLDVGERGFSYHQEAKLDMRMDQTQTLSAYEVVNTWPYEKLVSIFFRYGEEKFSK QIARKIEAERELKPIETTTELVEIIKAAIPAPARRTGGHPAKRVFQAIRIAVNDELGAFESSIEQAIDSVKPGGRISVIT FHSLEDRLCKQVFQEYSKGPDIPRGLPVVPPEYQPKLKKITRKPITSSNEELEHNNRARSAKLRVVEILK
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family
Homologues:
Organism=Homo sapiens, GI165377209, Length=333, Percent_Identity=32.4324324324324, Blast_Score=158, Evalue=5e-39, Organism=Homo sapiens, GI165377202, Length=187, Percent_Identity=34.7593582887701, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1786270, Length=314, Percent_Identity=42.9936305732484, Blast_Score=243, Evalue=2e-65, Organism=Drosophila melanogaster, GI62472493, Length=334, Percent_Identity=32.3353293413174, Blast_Score=147, Evalue=6e-36, Organism=Drosophila melanogaster, GI28571637, Length=334, Percent_Identity=32.3353293413174, Blast_Score=147, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RSMH_MACCJ (B9EB47)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002560154.1 - ProteinModelPortal: B9EB47 - GeneID: 7389923 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0751 - OMA: PQLDDPE - ProtClustDB: PRK00050 - GO: GO:0005737 - HAMAP: MF_01007 - InterPro: IPR002903 - PANTHER: PTHR11265 - PIRSF: PIRSF004486 - TIGRFAMs: TIGR00006
Pfam domain/function: PF01795 Methyltransf_5
EC number: NA
Molecular weight: Translated: 35101; Mature: 35101
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: BINDING 51-51 BINDING 78-78 BINDING 99-99 BINDING 106-106
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHHVTVLLEETVDQLNIDPNGIYVDCTLGGAGHSLYLVKQLQEGHLISIDQDQTAIDNA CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHCCH HIILKDYLDKVTFVKDNFRNLSDILAHLDIQKVDGILYDLGVSSPQLDVGERGFSYHQEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCHHHHC KLDMRMDQTQTLSAYEVVNTWPYEKLVSIFFRYGEEKFSKQIARKIEAERELKPIETTTE HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHH LVEIIKAAIPAPARRTGGHPAKRVFQAIRIAVNDELGAFESSIEQAIDSVKPGGRISVIT HHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEE FHSLEDRLCKQVFQEYSKGPDIPRGLPVVPPEYQPKLKKITRKPITSSNEELEHNNRARS EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCHHHH AKLRVVEILK HHHHHHHHCC >Mature Secondary Structure MFHHVTVLLEETVDQLNIDPNGIYVDCTLGGAGHSLYLVKQLQEGHLISIDQDQTAIDNA CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHCCH HIILKDYLDKVTFVKDNFRNLSDILAHLDIQKVDGILYDLGVSSPQLDVGERGFSYHQEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCHHHHC KLDMRMDQTQTLSAYEVVNTWPYEKLVSIFFRYGEEKFSKQIARKIEAERELKPIETTTE HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHH LVEIIKAAIPAPARRTGGHPAKRVFQAIRIAVNDELGAFESSIEQAIDSVKPGGRISVIT HHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEE FHSLEDRLCKQVFQEYSKGPDIPRGLPVVPPEYQPKLKKITRKPITSSNEELEHNNRARS EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCHHHH AKLRVVEILK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA