Click here to switch to the map view.

The map label for this gene is ctaF [H]

Identifier: 222150985

GI number: 222150985

Start: 796808

End: 797155

Strand: Direct

Name: ctaF [H]

Synonym: MCCL_0735

Alternate gene names: 222150985

Gene position: 796808-797155 (Clockwise)

Preceding gene: 222150984

Following gene: 222150986

Centisome position: 37.9

GC content: 33.91

Gene sequence:

>348_bases
ATGTCAAACGAAATTAATCATACGAAATTTAATCAAGAACGCTATGAATTCGAGAAACGTTTAAGAACAGAAGAAATGAG
AATGCAGGTAACAACTTTTGCAATCATGATCTTCTTAACCTTTGTTGCTTTTGCAATGGTTGCAGCAGGATTAAGCAAAG
AATTCGTTATCCCAGCAGTCTTATTACTCGCACTCATTCAAGTTATTCTTCAATTCTATTACTTTATGCATATGAAACAT
AAAGGACATGGAACAGCTCAGTTATTCATGTTAACTGGATTGTTTATCGCAGGTAGTTTTATTGTCATGGCACTTTACCT
AACTTGGTTAGGTGACCCATTAAAATAA

Upstream 100 bases:

>100_bases
ATGCAGCGAAATTTAATACAGCAGCGTTATACTGGCACTTTATCGACGTAGTCTGGGTATTCATCTTTACAGTAGTTTAC
TTGTTAGGGGTGTTAGGATA

Downstream 100 bases:

>100_bases
GAGTGAACCCGGAGCAATCCGGGTTTTTATTTTTGCCACAAATTAGTTGAAATATTGTGCTTTATTCTTCAAATTGTACG
CTATAATAGAAATGAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Caa-3605 subunit 4B; Cytochrome aa3 subunit 4B; Cytochrome c oxidase polypeptide IVB [H]

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSNEINHTKFNQERYEFEKRLRTEEMRMQVTTFAIMIFLTFVAFAMVAAGLSKEFVIPAVLLLALIQVILQFYYFMHMKH
KGHGTAQLFMLTGLFIAGSFIVMALYLTWLGDPLK

Sequences:

>Translated_115_residues
MSNEINHTKFNQERYEFEKRLRTEEMRMQVTTFAIMIFLTFVAFAMVAAGLSKEFVIPAVLLLALIQVILQFYYFMHMKH
KGHGTAQLFMLTGLFIAGSFIVMALYLTWLGDPLK
>Mature_114_residues
SNEINHTKFNQERYEFEKRLRTEEMRMQVTTFAIMIFLTFVAFAMVAAGLSKEFVIPAVLLLALIQVILQFYYFMHMKHK
GHGTAQLFMLTGLFIAGSFIVMALYLTWLGDPLK

Specific function: Unknown

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014257
- InterPro:   IPR005171 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 13362; Mature: 13231

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEINHTKFNQERYEFEKRLRTEEMRMQVTTFAIMIFLTFVAFAMVAAGLSKEFVIPAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLALIQVILQFYYFMHMKHKGHGTAQLFMLTGLFIAGSFIVMALYLTWLGDPLK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNEINHTKFNQERYEFEKRLRTEEMRMQVTTFAIMIFLTFVAFAMVAAGLSKEFVIPAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLALIQVILQFYYFMHMKHKGHGTAQLFMLTGLFIAGSFIVMALYLTWLGDPLK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377 [H]