| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150935
Identifier: 222150935
GI number: 222150935
Start: 737790
End: 738734
Strand: Direct
Name: 222150935
Synonym: MCCL_0685
Alternate gene names: NA
Gene position: 737790-738734 (Clockwise)
Preceding gene: 222150934
Following gene: 222150937
Centisome position: 35.09
GC content: 40.11
Gene sequence:
>945_bases ATGATAGCGAAATATCATGAAACGAATGATAAATTATTGCTGCTTCACGAGTTACAAGGTCGAATCAGATTGTCGAGGTC AGATAATGATATATTGCTGCGTTACTTGTCTGGGCTTGAGGGTGAACGTAAGTTTCTGGATGTTATGGGTGAAATCGATG ATGTTGTAATACTCTGGGATATTTATCTGGAGGACTATAGTGCGCAGTTTGATTTTTTAGTGTTAGCTGGGCGGTATGTG TTCCATTTTGACGTTAAGCATTATAGTGGGGTTTACGAGTATAAGGATGGGTTGTTTAAAAGTGCGAATGGTCGTGTGAA TAAGCGTTTGATGATGCAGCTTACTGCTAGTGAAGCGGGGCTAAAGCAGTTTTTACTGAATCACGGCTTTCATTACAAAG TGACAAGTCGTGTTGTATTTATGAACGAATCGTTTCAATTGATCGGGGATACAGATAAATATATTTTGTTTTATTATGAT CTTGGACGTGTCGTGGACTATTTAAAGGGGAACGCTGGCATCTGTGAAGATATGATGGGGTTGAGTGAGACGCTGATCGC GCATCACGGTGATGACGCAAAGTTCTATAGTACTGATGATTATGATATGGATGATGTAAAGCCGGGTATACGATGTCCGG AGTGTCGTCGCATTGGTATGATTCGAGATGTTAAGGGTCATAAGTATCAATGTCGATGCGGGCATAGGGTGAGTAATCGT GAAGCAGTAGATATCGTGTACCGTATGTTAGAGCTGTTTCGCGTGGATAAGATTCGTAAATGCGATCTGAATCGTCATCT AGAAATGCCAGACAGAACTTTAAAGCGAATATTGAAACAGTATTACTATAAGAATGGAACTGGGAGAGGTACGTATTATA CGAAAGATAGCGTTCGGGACAATCAATTTTTAGATGATTTGGTGGATAACTATTTTGAATCGTAG
Upstream 100 bases:
>100_bases TATTTTCTGCTTTATTTTAGGTTATTTTGATGTGCAGTTTTTGAAAAATAGGTTTTTGACAGATTTGGTGGTTACGGGTA TGTTTTTTGTGAGGTGACAT
Downstream 100 bases:
>100_bases ATGTATGAATAAAAATGGCCTGGTAAATGGCCCGGTAAAAGTGTTATCGGACCATTTATCGGGCCATTTCGGTATTTTTG TAAAATAATGACCCGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MIAKYHETNDKLLLLHELQGRIRLSRSDNDILLRYLSGLEGERKFLDVMGEIDDVVILWDIYLEDYSAQFDFLVLAGRYV FHFDVKHYSGVYEYKDGLFKSANGRVNKRLMMQLTASEAGLKQFLLNHGFHYKVTSRVVFMNESFQLIGDTDKYILFYYD LGRVVDYLKGNAGICEDMMGLSETLIAHHGDDAKFYSTDDYDMDDVKPGIRCPECRRIGMIRDVKGHKYQCRCGHRVSNR EAVDIVYRMLELFRVDKIRKCDLNRHLEMPDRTLKRILKQYYYKNGTGRGTYYTKDSVRDNQFLDDLVDNYFES
Sequences:
>Translated_314_residues MIAKYHETNDKLLLLHELQGRIRLSRSDNDILLRYLSGLEGERKFLDVMGEIDDVVILWDIYLEDYSAQFDFLVLAGRYV FHFDVKHYSGVYEYKDGLFKSANGRVNKRLMMQLTASEAGLKQFLLNHGFHYKVTSRVVFMNESFQLIGDTDKYILFYYD LGRVVDYLKGNAGICEDMMGLSETLIAHHGDDAKFYSTDDYDMDDVKPGIRCPECRRIGMIRDVKGHKYQCRCGHRVSNR EAVDIVYRMLELFRVDKIRKCDLNRHLEMPDRTLKRILKQYYYKNGTGRGTYYTKDSVRDNQFLDDLVDNYFES >Mature_314_residues MIAKYHETNDKLLLLHELQGRIRLSRSDNDILLRYLSGLEGERKFLDVMGEIDDVVILWDIYLEDYSAQFDFLVLAGRYV FHFDVKHYSGVYEYKDGLFKSANGRVNKRLMMQLTASEAGLKQFLLNHGFHYKVTSRVVFMNESFQLIGDTDKYILFYYD LGRVVDYLKGNAGICEDMMGLSETLIAHHGDDAKFYSTDDYDMDDVKPGIRCPECRRIGMIRDVKGHKYQCRCGHRVSNR EAVDIVYRMLELFRVDKIRKCDLNRHLEMPDRTLKRILKQYYYKNGTGRGTYYTKDSVRDNQFLDDLVDNYFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36988; Mature: 36988
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAKYHETNDKLLLLHELQGRIRLSRSDNDILLRYLSGLEGERKFLDVMGEIDDVVILWD CCCCEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEE IYLEDYSAQFDFLVLAGRYVFHFDVKHYSGVYEYKDGLFKSANGRVNKRLMMQLTASEAG EEHHCCCCCEEEEEEECCEEEEEEHHHHCCHHHHHCCHHCCCCCCCCCEEEEEEHHHHHH LKQFLLNHGFHYKVTSRVVFMNESFQLIGDTDKYILFYYDLGRVVDYLKGNAGICEDMMG HHHHHHHCCCEEEEEEEEEEECCCEEEECCCCCEEEEEEEHHHHHHHHCCCCCHHHHHHH LSETLIAHHGDDAKFYSTDDYDMDDVKPGIRCPECRRIGMIRDVKGHKYQCRCGHRVSNR HHHHHHHCCCCCCCEEECCCCCHHHCCCCCCCCCHHHCCCEECCCCCEEEEECCCCCCCC EAVDIVYRMLELFRVDKIRKCDLNRHLEMPDRTLKRILKQYYYKNGTGRGTYYTKDSVRD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCC NQFLDDLVDNYFES HHHHHHHHHHHHCC >Mature Secondary Structure MIAKYHETNDKLLLLHELQGRIRLSRSDNDILLRYLSGLEGERKFLDVMGEIDDVVILWD CCCCEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEE IYLEDYSAQFDFLVLAGRYVFHFDVKHYSGVYEYKDGLFKSANGRVNKRLMMQLTASEAG EEHHCCCCCEEEEEEECCEEEEEEHHHHCCHHHHHCCHHCCCCCCCCCEEEEEEHHHHHH LKQFLLNHGFHYKVTSRVVFMNESFQLIGDTDKYILFYYDLGRVVDYLKGNAGICEDMMG HHHHHHHCCCEEEEEEEEEEECCCEEEECCCCCEEEEEEEHHHHHHHHCCCCCHHHHHHH LSETLIAHHGDDAKFYSTDDYDMDDVKPGIRCPECRRIGMIRDVKGHKYQCRCGHRVSNR HHHHHHHCCCCCCCEEECCCCCHHHCCCCCCCCCHHHCCCEECCCCCEEEEECCCCCCCC EAVDIVYRMLELFRVDKIRKCDLNRHLEMPDRTLKRILKQYYYKNGTGRGTYYTKDSVRD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCC NQFLDDLVDNYFES HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA