| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is tagH [H]
Identifier: 222150900
GI number: 222150900
Start: 700368
End: 701171
Strand: Direct
Name: tagH [H]
Synonym: MCCL_0650
Alternate gene names: 222150900
Gene position: 700368-701171 (Clockwise)
Preceding gene: 222150899
Following gene: 222150903
Centisome position: 33.31
GC content: 31.22
Gene sequence:
>804_bases ATGAATGAATCAGTAGTAATTAAAAATGTAACCAAGAAATATAGAATGTACAAATCTAATAAGGAAAGATTAAAAGATCT AATAATCCCAGGTAAAGCGGGAGAGGATTTTTATGCACTTCAAGATATTACGTTTACCGCTTATGAAGGTGATGTAATCG GACTTGTCGGTATCAATGGTTCAGGTAAGTCGACATTATCGAATATAATAGGAGGCATCATACCACCTACTGAAGGTAAC TTAGAAAAATATGGAGAAGTTAACGTAATTGCTATTAATGCTGGATTAAATGGAAATTTAACAGGTATGGAAAACATTGA ATTTAAATGTCTGTTATTAGGTTATTCTCAGAAACAAATTAAAGCACTTACGCCTGAGATAGTAAAATTCTCGGAGTTAG GGGATTTTATTTATCAGCCCGTGAAAAAATATTCTAGTGGTATGAAATCAAAGTTGGGCTTTGCTATTAGTGTCACTGTA AATCCTGATATTCTAGTAATAGACGAAGCATTATCGGTTGGTGATCAGACATTTGCTGATAAAAGCTTAGCAAAAATGCA AGAGTTTAAAGAGCAGAATAAAACAATATTTTTTGTGAGTCACAACTTAGGACAAGTAAAGAAATTCTGTACAAAAATTG CTTGGATTGAGGGCGGATTTTTAAAAGAATTTGGTGACAAAGATACTGTTATGAAGCATTATGAAGAGTTTATTAATGAT TTCAAAAAGATGAGTAAAGAAGAACAAGAACATTTTAAGAAAAATTTAAATGATAAAAGAAAAGTAAGAAAAAAATCGCA GTAG
Upstream 100 bases:
>100_bases CTATAGATTTTGCCTTAAAAAACGAAGAAATGCGTGAAGAAGTAATGGAATATATCAAGAGAATCGCGCAACAATAAGCC AGTGAATAGGTGAATAAGTT
Downstream 100 bases:
>100_bases TCTTATGACTATTGCGATTTTTGATTAAATTAATTGCCATAAAGTTCTTTTTTTATTTGAGTTGTAGATATGCCTTCAGT TCTTTCTAAGTAAACGACTT
Product: teichoic acids export protein ATP-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNESVVIKNVTKKYRMYKSNKERLKDLIIPGKAGEDFYALQDITFTAYEGDVIGLVGINGSGKSTLSNIIGGIIPPTEGN LEKYGEVNVIAINAGLNGNLTGMENIEFKCLLLGYSQKQIKALTPEIVKFSELGDFIYQPVKKYSSGMKSKLGFAISVTV NPDILVIDEALSVGDQTFADKSLAKMQEFKEQNKTIFFVSHNLGQVKKFCTKIAWIEGGFLKEFGDKDTVMKHYEEFIND FKKMSKEEQEHFKKNLNDKRKVRKKSQ
Sequences:
>Translated_267_residues MNESVVIKNVTKKYRMYKSNKERLKDLIIPGKAGEDFYALQDITFTAYEGDVIGLVGINGSGKSTLSNIIGGIIPPTEGN LEKYGEVNVIAINAGLNGNLTGMENIEFKCLLLGYSQKQIKALTPEIVKFSELGDFIYQPVKKYSSGMKSKLGFAISVTV NPDILVIDEALSVGDQTFADKSLAKMQEFKEQNKTIFFVSHNLGQVKKFCTKIAWIEGGFLKEFGDKDTVMKHYEEFIND FKKMSKEEQEHFKKNLNDKRKVRKKSQ >Mature_267_residues MNESVVIKNVTKKYRMYKSNKERLKDLIIPGKAGEDFYALQDITFTAYEGDVIGLVGINGSGKSTLSNIIGGIIPPTEGN LEKYGEVNVIAINAGLNGNLTGMENIEFKCLLLGYSQKQIKALTPEIVKFSELGDFIYQPVKKYSSGMKSKLGFAISVTV NPDILVIDEALSVGDQTFADKSLAKMQEFKEQNKTIFFVSHNLGQVKKFCTKIAWIEGGFLKEFGDKDTVMKHYEEFIND FKKMSKEEQEHFKKNLNDKRKVRKKSQ
Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]
COG id: COG1134
COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27436953, Length=196, Percent_Identity=28.0612244897959, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI31657092, Length=265, Percent_Identity=25.6603773584906, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI27262624, Length=238, Percent_Identity=27.3109243697479, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI27262626, Length=238, Percent_Identity=27.3109243697479, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI27477115, Length=197, Percent_Identity=26.9035532994924, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI45446740, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI47078218, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI6005701, Length=197, Percent_Identity=26.3959390862944, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27881501, Length=241, Percent_Identity=26.1410788381743, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI30795238, Length=241, Percent_Identity=26.1410788381743, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI153792144, Length=203, Percent_Identity=24.6305418719212, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=23.9130434782609, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1789032, Length=212, Percent_Identity=24.5283018867925, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787758, Length=209, Percent_Identity=24.8803827751196, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787029, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=23.175965665236, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994943, Length=195, Percent_Identity=24.6153846153846, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87081782, Length=201, Percent_Identity=28.8557213930348, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=24.5192307692308, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=24.2105263157895, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1788761, Length=209, Percent_Identity=23.444976076555, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786398, Length=209, Percent_Identity=24.8803827751196, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=20.9090909090909, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=21.8604651162791, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1790467, Length=224, Percent_Identity=23.6607142857143, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87082267, Length=198, Percent_Identity=21.2121212121212, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533608, Length=269, Percent_Identity=23.4200743494424, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17510237, Length=207, Percent_Identity=25.6038647342995, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24643674, Length=235, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI221512771, Length=208, Percent_Identity=24.0384615384615, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28573573, Length=201, Percent_Identity=25.3731343283582, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573571, Length=201, Percent_Identity=25.3731343283582, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648314, Length=226, Percent_Identity=22.1238938053097, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015860 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.40 [H]
Molecular weight: Translated: 30066; Mature: 30066
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESVVIKNVTKKYRMYKSNKERLKDLIIPGKAGEDFYALQDITFTAYEGDVIGLVGING CCCCEEEHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCEEEEEEECC SGKSTLSNIIGGIIPPTEGNLEKYGEVNVIAINAGLNGNLTGMENIEFKCLLLGYSQKQI CCHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHH KALTPEIVKFSELGDFIYQPVKKYSSGMKSKLGFAISVTVNPDILVIDEALSVGDQTFAD HHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCEEEEECHHHCCCHHHHH KSLAKMQEFKEQNKTIFFVSHNLGQVKKFCTKIAWIEGGFLKEFGDKDTVMKHYEEFIND HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH FKKMSKEEQEHFKKNLNDKRKVRKKSQ HHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MNESVVIKNVTKKYRMYKSNKERLKDLIIPGKAGEDFYALQDITFTAYEGDVIGLVGING CCCCEEEHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCEEEEEEECC SGKSTLSNIIGGIIPPTEGNLEKYGEVNVIAINAGLNGNLTGMENIEFKCLLLGYSQKQI CCHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHH KALTPEIVKFSELGDFIYQPVKKYSSGMKSKLGFAISVTVNPDILVIDEALSVGDQTFAD HHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCEEEEECHHHCCCHHHHH KSLAKMQEFKEQNKTIFFVSHNLGQVKKFCTKIAWIEGGFLKEFGDKDTVMKHYEEFIND HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH FKKMSKEEQEHFKKNLNDKRKVRKKSQ HHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA