| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is metQ [H]
Identifier: 222150791
GI number: 222150791
Start: 579398
End: 580222
Strand: Direct
Name: metQ [H]
Synonym: MCCL_0541
Alternate gene names: 222150791
Gene position: 579398-580222 (Clockwise)
Preceding gene: 222150790
Following gene: 222150792
Centisome position: 27.56
GC content: 34.79
Gene sequence:
>825_bases ATGAAAAAGTTTATATCATTATTATTCGTAGCTACATTAGTACTTGTACTTGCAGCTTGTGGAGGTAACGAAAAGAAAGC TTCTAAAGAAGACGATAAGACAATTACCGTCGGCGCTTCACCAGCACCGCATGCCGAATTGCTTGAACATGTTAAACCTG TATTAGAAAAAGAAGGCTATACTTTAAAGATTAAGACAATCAATGACTACACAACGCCAAACCGTTTTCTGGATGCAGGT GAACTTGATGCAAACTTCTTCCAGCATACACCATACTTAGATACTGAGAAGAAAGCAAAAGGATACAAAATTGAATCAGC TGGTAACATCCATATCGAACCGATGGCTATTTACTCAAAAAAATATAAATCATTAAAAGATTTACCAGAAAACGCTGAAA TATTTGTTTCAAACAATCCTGCAGAAGAAGGTCGTTTCTTATCATTCTTCACTGAAGCAGGATTAATCAAATTGAAAGAT GGTGTAGATCCAGTAAAAGCGACATTTAAAGATATTAAAGAAAACAAGAAAAACATTAAATTTAACAACAAGCAAAGTGC TGAATTCTTACCGAAATCATACAACAATGGTGAAGGGGATGCAGTGATCATCAACTCTAACTTTGCACTTGAAAATAAAC TGAACCCAGTAAAAGATTCAATTGCCATTGAAAAGAGTGACTCACCTTACGCGAACTTGATTGCGGTACAAGAAGGGCAC AAAGGTGATGCTAAGATTAAAGCTTTAGTGAAAGCGTTACAATCTAAAGAGACACAAGATTATATCAATAAAAAATATAA TGGTGCTGTAATTCCAGCAAAATAA
Upstream 100 bases:
>100_bases CGGTGATATGATCACAAAACGTATTGATAAACGATAATCAGTTCCAATGGAATTTGACTATAAATCAGATAAATTAAATA ACGGAAAGAGAGTGAATTAA
Downstream 100 bases:
>100_bases ATAATTACTGATGAATGTTCTATAGGAGCATTCATCTTTTTTTATTATTTAATCTCATTTAATTCATATTCGTTCTCAAT TACGTTATAATTAAAACTGT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKKFISLLFVATLVLVLAACGGNEKKASKEDDKTITVGASPAPHAELLEHVKPVLEKEGYTLKIKTINDYTTPNRFLDAG ELDANFFQHTPYLDTEKKAKGYKIESAGNIHIEPMAIYSKKYKSLKDLPENAEIFVSNNPAEEGRFLSFFTEAGLIKLKD GVDPVKATFKDIKENKKNIKFNNKQSAEFLPKSYNNGEGDAVIINSNFALENKLNPVKDSIAIEKSDSPYANLIAVQEGH KGDAKIKALVKALQSKETQDYINKKYNGAVIPAK
Sequences:
>Translated_274_residues MKKFISLLFVATLVLVLAACGGNEKKASKEDDKTITVGASPAPHAELLEHVKPVLEKEGYTLKIKTINDYTTPNRFLDAG ELDANFFQHTPYLDTEKKAKGYKIESAGNIHIEPMAIYSKKYKSLKDLPENAEIFVSNNPAEEGRFLSFFTEAGLIKLKD GVDPVKATFKDIKENKKNIKFNNKQSAEFLPKSYNNGEGDAVIINSNFALENKLNPVKDSIAIEKSDSPYANLIAVQEGH KGDAKIKALVKALQSKETQDYINKKYNGAVIPAK >Mature_274_residues MKKFISLLFVATLVLVLAACGGNEKKASKEDDKTITVGASPAPHAELLEHVKPVLEKEGYTLKIKTINDYTTPNRFLDAG ELDANFFQHTPYLDTEKKAKGYKIESAGNIHIEPMAIYSKKYKSLKDLPENAEIFVSNNPAEEGRFLSFFTEAGLIKLKD GVDPVKATFKDIKENKKNIKFNNKQSAEFLPKSYNNGEGDAVIINSNFALENKLNPVKDSIAIEKSDSPYANLIAVQEGH KGDAKIKALVKALQSKETQDYINKKYNGAVIPAK
Specific function: Part of the ABC transporter complex metNIQ involved in methionine import. Binds the methionine and transfers it to the membrane-bound permease. It has also been shown to be involved in methionine sulfoxide transport (Probable) [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=272, Percent_Identity=38.2352941176471, Blast_Score=174, Evalue=7e-45, Organism=Escherichia coli, GI1790093, Length=247, Percent_Identity=32.7935222672065, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 30340; Mature: 30340
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFISLLFVATLVLVLAACGGNEKKASKEDDKTITVGASPAPHAELLEHVKPVLEKEGY CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC TLKIKTINDYTTPNRFLDAGELDANFFQHTPYLDTEKKAKGYKIESAGNIHIEPMAIYSK EEEEEEECCCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHH KYKSLKDLPENAEIFVSNNPAEEGRFLSFFTEAGLIKLKDGVDPVKATFKDIKENKKNIK HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCC FNNKQSAEFLPKSYNNGEGDAVIINSNFALENKLNPVKDSIAIEKSDSPYANLIAVQEGH CCCCCCHHHCCCCCCCCCCCEEEEECCEEECCCCCCCHHHEEEECCCCCCEEEEEEECCC KGDAKIKALVKALQSKETQDYINKKYNGAVIPAK CCHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCC >Mature Secondary Structure MKKFISLLFVATLVLVLAACGGNEKKASKEDDKTITVGASPAPHAELLEHVKPVLEKEGY CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC TLKIKTINDYTTPNRFLDAGELDANFFQHTPYLDTEKKAKGYKIESAGNIHIEPMAIYSK EEEEEEECCCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHH KYKSLKDLPENAEIFVSNNPAEEGRFLSFFTEAGLIKLKDGVDPVKATFKDIKENKKNIK HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCC FNNKQSAEFLPKSYNNGEGDAVIINSNFALENKLNPVKDSIAIEKSDSPYANLIAVQEGH CCCCCCHHHCCCCCCCCCCCEEEEECCEEECCCCCCCHHHEEEECCCCCCEEEEEEECCC KGDAKIKALVKALQSKETQDYINKKYNGAVIPAK CCHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]