| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yhbJ [C]
Identifier: 222150766
GI number: 222150766
Start: 548167
End: 549069
Strand: Direct
Name: yhbJ [C]
Synonym: MCCL_0516
Alternate gene names: 222150766
Gene position: 548167-549069 (Clockwise)
Preceding gene: 222150765
Following gene: 222150767
Centisome position: 26.07
GC content: 37.65
Gene sequence:
>903_bases ATGTCGAACGAAGATACATATAAACGACTGGTTGTTGTCACTGGAATGAGCGGTGCAGGGAAAAGTGTTGCAATTCAATG TCTTGAAGACCTAGGTTATTTCTGTGTTGATAACCTTCCCCCTATATTGCTGCCAAAGTTTATCGAACTGATGAATAATA ATACAGAATCTCTGTCACGCGTAGCTATCGGGATTGACTTGCGTGGGAAAGATTTCTTTAATAGTTTACAAGAAGAAATT CAAAATATTATCAATTTAAATGAAGTACTCGTGCAAGTTTTATTTGTCGAAGCAAGTGATCACATATTAGTTTCTCGTTA TAAAGAGACAAGACGTACACACCCCCTTCAGGATAACATTTCATTGATTGATGCGATTCAGGAGGAGAGAAAGCTGCTTG CTGATTTAAGAGGGGTTGCAACACACATTATTGATTCTTCTGAATCCAAACCGAAAGCATTGCGTTCTAAAGTAATAGAA ATCTTTGGATCAGGTAAAGATAATATATTCACGATTAATGTGATGAGTTTCGGATTTAAGCATGGCTTACCGATTGATGC AGATATCGTGTTCGATGTGAGATTTTTACCGAACCCATACTACATAGAAGAAATGAGAAAATTAACAGGTCTCGATCCCC TCGTTTATGACTATGTCATGAAATGGAAAGAGACTGAAATGTTCTACCAAAAATTAATCGATCTATTGAAGTTTGTGATT CCTGGTTATATGCGCGAAGGTAAGAGTCAGGTCGTCATCGCTATCGGATGTACAGGTGGGCAACACCGTTCAGTTGCATT AAGTGAACGTATCAGTAATGAATTAAAGGACTTCTTTGATTTTGAACTTCATACTCGCCACAGAGATGCACTTATTGAGG GAACAATCAATGAAAAGGCTTAA
Upstream 100 bases:
>100_bases GCTTGAATGATTAATATATTCCGACAAATAGATACGCATTTTGTGCGTGTCTATTTTTATGAATTCATGTAGAATGAAAT TAAGATGAGGAGGAATATAT
Downstream 100 bases:
>100_bases AGTCTGTCTTATCGGCGGTGGTACAGGTCTTTCAGTTATGGCGAGAGGACTTAAAGAATACCCGGTTGATATCACAGCCA TTGTAACTGTTGCAGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSNEDTYKRLVVVTGMSGAGKSVAIQCLEDLGYFCVDNLPPILLPKFIELMNNNTESLSRVAIGIDLRGKDFFNSLQEEI QNIINLNEVLVQVLFVEASDHILVSRYKETRRTHPLQDNISLIDAIQEERKLLADLRGVATHIIDSSESKPKALRSKVIE IFGSGKDNIFTINVMSFGFKHGLPIDADIVFDVRFLPNPYYIEEMRKLTGLDPLVYDYVMKWKETEMFYQKLIDLLKFVI PGYMREGKSQVVIAIGCTGGQHRSVALSERISNELKDFFDFELHTRHRDALIEGTINEKA
Sequences:
>Translated_300_residues MSNEDTYKRLVVVTGMSGAGKSVAIQCLEDLGYFCVDNLPPILLPKFIELMNNNTESLSRVAIGIDLRGKDFFNSLQEEI QNIINLNEVLVQVLFVEASDHILVSRYKETRRTHPLQDNISLIDAIQEERKLLADLRGVATHIIDSSESKPKALRSKVIE IFGSGKDNIFTINVMSFGFKHGLPIDADIVFDVRFLPNPYYIEEMRKLTGLDPLVYDYVMKWKETEMFYQKLIDLLKFVI PGYMREGKSQVVIAIGCTGGQHRSVALSERISNELKDFFDFELHTRHRDALIEGTINEKA >Mature_299_residues SNEDTYKRLVVVTGMSGAGKSVAIQCLEDLGYFCVDNLPPILLPKFIELMNNNTESLSRVAIGIDLRGKDFFNSLQEEIQ NIINLNEVLVQVLFVEASDHILVSRYKETRRTHPLQDNISLIDAIQEERKLLADLRGVATHIIDSSESKPKALRSKVIEI FGSGKDNIFTINVMSFGFKHGLPIDADIVFDVRFLPNPYYIEEMRKLTGLDPLVYDYVMKWKETEMFYQKLIDLLKFVIP GYMREGKSQVVIAIGCTGGQHRSVALSERISNELKDFFDFELHTRHRDALIEGTINEKA
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=284, Percent_Identity=39.7887323943662, Blast_Score=194, Evalue=8e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y516_MACCJ (B9EAG2)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002559919.1 - ProteinModelPortal: B9EAG2 - GeneID: 7390488 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0516 - OMA: GIGCTGG - ProtClustDB: PRK05416 - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 34178; Mature: 34047
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEDTYKRLVVVTGMSGAGKSVAIQCLEDLGYFCVDNLPPILLPKFIELMNNNTESLSR CCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCHHHHHH VAIGIDLRGKDFFNSLQEEIQNIINLNEVLVQVLFVEASDHILVSRYKETRRTHPLQDNI EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCH SLIDAIQEERKLLADLRGVATHIIDSSESKPKALRSKVIEIFGSGKDNIFTINVMSFGFK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCC HGLPIDADIVFDVRFLPNPYYIEEMRKLTGLDPLVYDYVMKWKETEMFYQKLIDLLKFVI CCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PGYMREGKSQVVIAIGCTGGQHRSVALSERISNELKDFFDFELHTRHRDALIEGTINEKA CHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCC >Mature Secondary Structure SNEDTYKRLVVVTGMSGAGKSVAIQCLEDLGYFCVDNLPPILLPKFIELMNNNTESLSR CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCHHHHHH VAIGIDLRGKDFFNSLQEEIQNIINLNEVLVQVLFVEASDHILVSRYKETRRTHPLQDNI EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCH SLIDAIQEERKLLADLRGVATHIIDSSESKPKALRSKVIEIFGSGKDNIFTINVMSFGFK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCC HGLPIDADIVFDVRFLPNPYYIEEMRKLTGLDPLVYDYVMKWKETEMFYQKLIDLLKFVI CCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PGYMREGKSQVVIAIGCTGGQHRSVALSERISNELKDFFDFELHTRHRDALIEGTINEKA CHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA