| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is sle1 [H]
Identifier: 222150756
GI number: 222150756
Start: 536333
End: 536773
Strand: Direct
Name: sle1 [H]
Synonym: MCCL_0506
Alternate gene names: 222150756
Gene position: 536333-536773 (Clockwise)
Preceding gene: 222150755
Following gene: 222150757
Centisome position: 25.51
GC content: 36.73
Gene sequence:
>441_bases ATGAAAAAAGTTATACTTTCAATAATTGCAATAATCATGCTGGGGACTGCAACTGAAGCAATTTATCCAAATAGTCAACA GGCACATGCTTATAATAATCCTGTAAAGAAAGCTGGATATAATTATTATTATAAAGGAAGCTGTGTGTATTATGCGTTTA ATAGACGTGCACAACTTAAACGTCCTGTAAGCAATAGTTGGAATAGTGCAAAGTACTGGCCATCAAATGCACGACGCATG GGGTATAAAGTGAGTCGTACGCCCGTATATGGTTCAGTCATGATTTCTCAAAAAGGTTATCATGGTCATGCAGCAGTTGT AGAACGTATTAATCGCAATGGAAGTATACTCGTTTCTGAAATGAACTATCCGCGTAGTGGTGTGAAGACTTATAGAACAA TTTCAAAAGCACAGCGCGCTCAGTTTGAATATATTTACTAA
Upstream 100 bases:
>100_bases AGTTATATTAACCATATATTACATGTAAGTTACATTGAATTTTTCGCTTTTTTTATATGGTAATATCTATTTAGCTAATA AAACAACCGGAGGATATTAC
Downstream 100 bases:
>100_bases TAAAATAATATTAGAATGATTAAATCTTACACACCGTTCGTGTTGTAAGATTTTTTTGCTATAATATGTGATGAGGTGTT CTATGAAAAGATTGATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKKVILSIIAIIMLGTATEAIYPNSQQAHAYNNPVKKAGYNYYYKGSCVYYAFNRRAQLKRPVSNSWNSAKYWPSNARRM GYKVSRTPVYGSVMISQKGYHGHAAVVERINRNGSILVSEMNYPRSGVKTYRTISKAQRAQFEYIY
Sequences:
>Translated_146_residues MKKVILSIIAIIMLGTATEAIYPNSQQAHAYNNPVKKAGYNYYYKGSCVYYAFNRRAQLKRPVSNSWNSAKYWPSNARRM GYKVSRTPVYGSVMISQKGYHGHAAVVERINRNGSILVSEMNYPRSGVKTYRTISKAQRAQFEYIY >Mature_146_residues MKKVILSIIAIIMLGTATEAIYPNSQQAHAYNNPVKKAGYNYYYKGSCVYYAFNRRAQLKRPVSNSWNSAKYWPSNARRM GYKVSRTPVYGSVMISQKGYHGHAAVVERINRNGSILVSEMNYPRSGVKTYRTISKAQRAQFEYIY
Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Cell surface (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007921 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF05257 CHAP; PF01476 LysM [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 16738; Mature: 16738
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVILSIIAIIMLGTATEAIYPNSQQAHAYNNPVKKAGYNYYYKGSCVYYAFNRRAQLK CHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCCCEEECCCEEEEEECCCCHHC RPVSNSWNSAKYWPSNARRMGYKVSRTPVYGSVMISQKGYHGHAAVVERINRNGSILVSE CCCCCCCCCCCCCCCCHHHCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEE MNYPRSGVKTYRTISKAQRAQFEYIY CCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKVILSIIAIIMLGTATEAIYPNSQQAHAYNNPVKKAGYNYYYKGSCVYYAFNRRAQLK CHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCCCEEECCCEEEEEECCCCHHC RPVSNSWNSAKYWPSNARRMGYKVSRTPVYGSVMISQKGYHGHAAVVERINRNGSILVSE CCCCCCCCCCCCCCCCHHHCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEE MNYPRSGVKTYRTISKAQRAQFEYIY CCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA