Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is yqgC [H]

Identifier: 222150680

GI number: 222150680

Start: 455503

End: 455985

Strand: Direct

Name: yqgC [H]

Synonym: MCCL_0430

Alternate gene names: 222150680

Gene position: 455503-455985 (Clockwise)

Preceding gene: 222150679

Following gene: 222150681

Centisome position: 21.67

GC content: 37.89

Gene sequence:

>483_bases
ATGATGGTATTATTATGGACGTTTGTCATTATTAGTTTTATCGCAGCATTTGTTGGGCTGGTCGTACCAATGTTGCCAGG
TGTGCTGTTGATGTGGGTAGGTTTTTTTGTTTATCATTTTGGTATCAATAACGGAGAACTGACATGGTTCTTCTGGATTG
CGATGGCAATGCTGACGTTTGTTACACTAATCAGCGACTATATAGCTGGCAGTTACTTCGTTAAAAGATATGGTGGATCA
AGAGCAGGAGAATTTACAGCAGCAATCGGTATCATTATCGGTAGCTTCCTTTTTCCACCGCTTGGCATTATCATTGTGCC
ATTTATAATGGTATTATTTGTTGAACTGTTTATCCAAAAAGATATAACAAGAGCTTTTAATGCGAGCATCGGATCACTCT
TTGGATTTTTGACGAGTACCGTTGCTAAGTTTTTAATATTGATTATCATGGTCATCTGGTTCGTACTGGATGTATTGATA
TAG

Upstream 100 bases:

>100_bases
TTGTAGGACTAGGAAATGTATTTTATGTATCTTCGTCGTTCGTATTGATTGCATTTATCTTATTAATATTTACGAAACCC
GTTAAGATGGAGGATTTAGC

Downstream 100 bases:

>100_bases
AGTTTAGTGGAAACCACAGTCTTTTTAATAGATAGGGATGTCAAGTTAGCACATAATAAACATGAGCCAACTTACTATAA
TCAAAATGTTTCATAAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMVLLWTFVIISFIAAFVGLVVPMLPGVLLMWVGFFVYHFGINNGELTWFFWIAMAMLTFVTLISDYIAGSYFVKRYGGS
RAGEFTAAIGIIIGSFLFPPLGIIIVPFIMVLFVELFIQKDITRAFNASIGSLFGFLTSTVAKFLILIIMVIWFVLDVLI

Sequences:

>Translated_160_residues
MMVLLWTFVIISFIAAFVGLVVPMLPGVLLMWVGFFVYHFGINNGELTWFFWIAMAMLTFVTLISDYIAGSYFVKRYGGS
RAGEFTAAIGIIIGSFLFPPLGIIIVPFIMVLFVELFIQKDITRAFNASIGSLFGFLTSTVAKFLILIIMVIWFVLDVLI
>Mature_160_residues
MMVLLWTFVIISFIAAFVGLVVPMLPGVLLMWVGFFVYHFGINNGELTWFFWIAMAMLTFVTLISDYIAGSYFVKRYGGS
RAGEFTAAIGIIIGSFLFPPLGIIIVPFIMVLFVELFIQKDITRAFNASIGSLFGFLTSTVAKFLILIIMVIWFVLDVLI

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007403 [H]

Pfam domain/function: PF04306 DUF456 [H]

EC number: NA

Molecular weight: Translated: 17945; Mature: 17945

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVLLWTFVIISFIAAFVGLVVPMLPGVLLMWVGFFVYHFGINNGELTWFFWIAMAMLTF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VTLISDYIAGSYFVKRYGGSRAGEFTAAIGIIIGSFLFPPLGIIIVPFIMVLFVELFIQK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DITRAFNASIGSLFGFLTSTVAKFLILIIMVIWFVLDVLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MMVLLWTFVIISFIAAFVGLVVPMLPGVLLMWVGFFVYHFGINNGELTWFFWIAMAMLTF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VTLISDYIAGSYFVKRYGGSRAGEFTAAIGIIIGSFLFPPLGIIIVPFIMVLFVELFIQK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DITRAFNASIGSLFGFLTSTVAKFLILIIMVIWFVLDVLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]