Click here to switch to the map view.

The map label for this gene is gntR [H]

Identifier: 222150655

GI number: 222150655

Start: 432789

End: 433220

Strand: Direct

Name: gntR [H]

Synonym: MCCL_0405

Alternate gene names: 222150655

Gene position: 432789-433220 (Clockwise)

Preceding gene: 222150654

Following gene: 222150656

Centisome position: 20.59

GC content: 31.94

Gene sequence:

>432_bases
ATGAGATTGATGATCGAAAGCTTCAGTTTTGAAAGAATGAGTAAAAAGGATGTATCTAAAGTTGTATTGGAGCTCCATAA
GAAACTTGAGATGATGAAAGTAGCGGTTAAGTTTGATGATGCTGCAGAGTTTGCATTACAAGACATTCTTTTTCATCAAA
CGATGATTGAAAGTATTCATCATAAGCAGTTAGAAAAGTTATGGATCAGCATTAAACCCACAATGCTTATACTGAACTTA
ATTTCGATGGAGGAAAGAATGAAGTTTAATAAAGATGATTTTGAACGCATATTCAAGAATCATCATGAATATATCTTGAC
TGTCGAACAAAGAGATAGAAAAGGTTATAAAGAAGTACTTCATATGAATTTCGATGATGTACATGAAGAAATAGATGATT
TATTCTATTCGCAGACGAAGGAGGAAATATAG

Upstream 100 bases:

>100_bases
ATGCCTTAAGATTTTATCTAATGATAAATTGATTCGTTTAGAGCGTATGGGTGCAGTGATAATGGCTTTATCAGAAAATG
ATATAAAAGAGCTTTATGAC

Downstream 100 bases:

>100_bases
TGTTCAAAATAGGCGTAGATATAGGTACAACAAGTACAAAAGCGGTAATCTATAAAAATCAAGAGATAGTAGGGATACAT
CATGTTGAGTATCCGTTATT

Product: gluconate operon transcriptional repressor

Products: NA

Alternate protein names: P28 protein [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRLMIESFSFERMSKKDVSKVVLELHKKLEMMKVAVKFDDAAEFALQDILFHQTMIESIHHKQLEKLWISIKPTMLILNL
ISMEERMKFNKDDFERIFKNHHEYILTVEQRDRKGYKEVLHMNFDDVHEEIDDLFYSQTKEEI

Sequences:

>Translated_143_residues
MRLMIESFSFERMSKKDVSKVVLELHKKLEMMKVAVKFDDAAEFALQDILFHQTMIESIHHKQLEKLWISIKPTMLILNL
ISMEERMKFNKDDFERIFKNHHEYILTVEQRDRKGYKEVLHMNFDDVHEEIDDLFYSQTKEEI
>Mature_143_residues
MRLMIESFSFERMSKKDVSKVVLELHKKLEMMKVAVKFDDAAEFALQDILFHQTMIESIHHKQLEKLWISIKPTMLILNL
ISMEERMKFNKDDFERIFKNHHEYILTVEQRDRKGYKEVLHMNFDDVHEEIDDLFYSQTKEEI

Specific function: Transcriptional repressor of the gluconate operon (gntRKPZ), which encodes the proteins for gluconate utilization. Represses mRNA synthesis by binding to the gnt operator; the binding is suppressed by gluconate or glucono-delta-lactone [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 17396; Mature: 17396

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMIESFSFERMSKKDVSKVVLELHKKLEMMKVAVKFDDAAEFALQDILFHQTMIESIH
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HKQLEKLWISIKPTMLILNLISMEERMKFNKDDFERIFKNHHEYILTVEQRDRKGYKEVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
HMNFDDVHEEIDDLFYSQTKEEI
HCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLMIESFSFERMSKKDVSKVVLELHKKLEMMKVAVKFDDAAEFALQDILFHQTMIESIH
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HKQLEKLWISIKPTMLILNLISMEERMKFNKDDFERIFKNHHEYILTVEQRDRKGYKEVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
HMNFDDVHEEIDDLFYSQTKEEI
HCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8535972 [H]