| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yxaH [H]
Identifier: 222150645
GI number: 222150645
Start: 423039
End: 424175
Strand: Direct
Name: yxaH [H]
Synonym: MCCL_0395
Alternate gene names: 222150645
Gene position: 423039-424175 (Clockwise)
Preceding gene: 222150644
Following gene: 222150646
Centisome position: 20.12
GC content: 35.71
Gene sequence:
>1137_bases ATGACAAAACGTATAGAAAGTATTGATATTATGCGTGGAATCAGTATCATGGGGATTTTATTCATGAATATCGTTGGTTT TCATATGAATGAAGTTTATACGAATCCTCTGGATCACTTTCAGTTGTCTTTAGATAGAATGCTATATTACCTTGATATTT TATTCGTACACAATTCATTCTATCCTATTTTTTCATTTTTATTTGGGTTTGGTCTCGCTATTATGGCAACGAATATTAGG CAGCGTGGTGGAAATTTTATCCCAATATTGTATAGAAGGGTATTCGCACTACTTGCATTTGGTTACATTCATGGCTTACT GATCTTTTATGGGGATATATTAAATGTATATGCAGTGCTCGGCATGATTGCAATCCTCTTTTTGCTTATGCCGAATATCG TTAGTCTGATTGCTGCACTCGTGTTATCTATCATTTTCCTGCTAATAAATCTGATGGTTATCATGACTGTAATACTCTCA CCAGAAGCAATTTCTGCTGCTTCTTCTACCAGTGCTGCACAGCGCTGGATACAAGTGATGCAAAGCGGAGACTTTAGTCA AATACTCGCGCTGAATCAGCAATTCTTTCTGGAGAATTTCACAGCATTAAGTTTAACCGGGATATTTGGTTATGGATTAT CGGTTCTGCCTTTTATCTTATTTGGAATGTATGCGATGCGTGCTGATATGATTGACGCTATACTTAAGCATAAACGTATG ATGATGATAACAGCAGCTGTATCACTTGCCTTAGGACTACTGATTAAATACTATGTCATCTATGCACACCTGGATATGTA TGCATCTCAGTCGTTCATATTCTATGGTGGTACATTAGTAGCAGTCTGTTATTTTATCGTAGTTGTGCTACTTACAGATA ATCAACTGTTCTATAAGGTGATGCAGCCATTTCGCTATGCGGGTAAGATGAGTTTTTCATTATATATATTGCAGAGTATC TGTATGTTCATCATATTTTATGTGCTACGTTTATATGCGAAGCTGGATCTGTATCAAGTATTCTTGATCGCGCTGTTTAT TATAATCTTTGAACTGGCCATTGCTACATATTATATGAAAAGACATAAATATGGACCATTAGAATGGGTATGGAGGAAAA TTACATACTTAAAATGA
Upstream 100 bases:
>100_bases AGAATATTAAACTAGTTGATCCTGATAATGGACATGATATCGACTGTAAGATAGATGGATTTGGTCAAATGAGCCTAAAA AGTGAATTCGTAAAAAAGGT
Downstream 100 bases:
>100_bases AGGCTTAAGCGATAGGAAATAAGATGATATTATGGTACAATGTTAATCGAAAAGGTGGTGTATCAAATGCATAATATACA GGAACGCTTAGCTGAATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTKRIESIDIMRGISIMGILFMNIVGFHMNEVYTNPLDHFQLSLDRMLYYLDILFVHNSFYPIFSFLFGFGLAIMATNIR QRGGNFIPILYRRVFALLAFGYIHGLLIFYGDILNVYAVLGMIAILFLLMPNIVSLIAALVLSIIFLLINLMVIMTVILS PEAISAASSTSAAQRWIQVMQSGDFSQILALNQQFFLENFTALSLTGIFGYGLSVLPFILFGMYAMRADMIDAILKHKRM MMITAAVSLALGLLIKYYVIYAHLDMYASQSFIFYGGTLVAVCYFIVVVLLTDNQLFYKVMQPFRYAGKMSFSLYILQSI CMFIIFYVLRLYAKLDLYQVFLIALFIIIFELAIATYYMKRHKYGPLEWVWRKITYLK
Sequences:
>Translated_378_residues MTKRIESIDIMRGISIMGILFMNIVGFHMNEVYTNPLDHFQLSLDRMLYYLDILFVHNSFYPIFSFLFGFGLAIMATNIR QRGGNFIPILYRRVFALLAFGYIHGLLIFYGDILNVYAVLGMIAILFLLMPNIVSLIAALVLSIIFLLINLMVIMTVILS PEAISAASSTSAAQRWIQVMQSGDFSQILALNQQFFLENFTALSLTGIFGYGLSVLPFILFGMYAMRADMIDAILKHKRM MMITAAVSLALGLLIKYYVIYAHLDMYASQSFIFYGGTLVAVCYFIVVVLLTDNQLFYKVMQPFRYAGKMSFSLYILQSI CMFIIFYVLRLYAKLDLYQVFLIALFIIIFELAIATYYMKRHKYGPLEWVWRKITYLK >Mature_377_residues TKRIESIDIMRGISIMGILFMNIVGFHMNEVYTNPLDHFQLSLDRMLYYLDILFVHNSFYPIFSFLFGFGLAIMATNIRQ RGGNFIPILYRRVFALLAFGYIHGLLIFYGDILNVYAVLGMIAILFLLMPNIVSLIAALVLSIIFLLINLMVIMTVILSP EAISAASSTSAAQRWIQVMQSGDFSQILALNQQFFLENFTALSLTGIFGYGLSVLPFILFGMYAMRADMIDAILKHKRMM MITAAVSLALGLLIKYYVIYAHLDMYASQSFIFYGGTLVAVCYFIVVVLLTDNQLFYKVMQPFRYAGKMSFSLYILQSIC MFIIFYVLRLYAKLDLYQVFLIALFIIIFELAIATYYMKRHKYGPLEWVWRKITYLK
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788475, Length=397, Percent_Identity=23.9294710327456, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 43520; Mature: 43389
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRIESIDIMRGISIMGILFMNIVGFHMNEVYTNPLDHFQLSLDRMLYYLDILFVHNSF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH YPIFSFLFGFGLAIMATNIRQRGGNFIPILYRRVFALLAFGYIHGLLIFYGDILNVYAVL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMIAILFLLMPNIVSLIAALVLSIIFLLINLMVIMTVILSPEAISAASSTSAAQRWIQVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH QSGDFSQILALNQQFFLENFTALSLTGIFGYGLSVLPFILFGMYAMRADMIDAILKHKRM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMITAAVSLALGLLIKYYVIYAHLDMYASQSFIFYGGTLVAVCYFIVVVLLTDNQLFYKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCHHHHHH MQPFRYAGKMSFSLYILQSICMFIIFYVLRLYAKLDLYQVFLIALFIIIFELAIATYYMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHKYGPLEWVWRKITYLK HCCCCCHHHHHHHHHCCC >Mature Secondary Structure TKRIESIDIMRGISIMGILFMNIVGFHMNEVYTNPLDHFQLSLDRMLYYLDILFVHNSF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH YPIFSFLFGFGLAIMATNIRQRGGNFIPILYRRVFALLAFGYIHGLLIFYGDILNVYAVL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMIAILFLLMPNIVSLIAALVLSIIFLLINLMVIMTVILSPEAISAASSTSAAQRWIQVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH QSGDFSQILALNQQFFLENFTALSLTGIFGYGLSVLPFILFGMYAMRADMIDAILKHKRM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMITAAVSLALGLLIKYYVIYAHLDMYASQSFIFYGGTLVAVCYFIVVVLLTDNQLFYKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCHHHHHH MQPFRYAGKMSFSLYILQSICMFIIFYVLRLYAKLDLYQVFLIALFIIIFELAIATYYMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHKYGPLEWVWRKITYLK HCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]