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The map label for this gene is potC [C]

Identifier: 222150592

GI number: 222150592

Start: 359172

End: 359966

Strand: Direct

Name: potC [C]

Synonym: MCCL_0342

Alternate gene names: 222150592

Gene position: 359172-359966 (Clockwise)

Preceding gene: 222150591

Following gene: 222150593

Centisome position: 17.08

GC content: 35.22

Gene sequence:

>795_bases
ATGAAAAGTGTAGTTAAGAATTTAAGTTTAATGTTCATCTGTTTATATTTAGCGATACCTCTTTTGGCAACTTTTCTTTA
TTCTATTTCAACAGACTGGAGTAGAAGCATATTACCTGAAGGGATTACGTTTAAATGGTACGGAGAATTATTTACGAATA
ATGACTTCCTTCACGCGATGATCAATTCTTTGATACTTGTTGGAGGTGTCACGATTGCAGCAGTGATTATTATGGTTCCG
GCAATATACGGAATCGTGCTCTATTTCCCGAAATTAGAACGCTTTATTAAATGGGCAATCATCGGTGTGTATACAATGCC
TGGCATTATTTCTAGTGTTGGGCTACTAAAAGCATATTCAAATAGTTCGATTCCGATGGTGTTTATTGTAGCAGGAGCCT
ATTTAGTGAGTATATTACCATTTATGTATCAAGGCATTAGAAATAACATGCGTAATATCAACGTCGTGCAGCTCGTTGAA
GCTGCTGAAATTCTGGGAGCGACAAAGATGCAGGCATTTCAGAAGATAATTCTACCGAATATCTTACCTGGTGTAATCGT
ATCTGCATTATTAAGCTTCAGTTTATTATTTGGCGAGTTTGTAATGATCAATATACTACTAGGATCAAACTTTAAGACCG
TGCAAATCTTCTTGATGGAGAACTTACAGAAGAATGGTCATTTATCTAGTGCGATTGTGGCATGTTACTTTGTATTGCTT
GCAGTTGTAACATTTATCATATTGAAACTAACAATGCATAAAGGAGTAAAAAAGCATGAGTTACATTCAAATTAA

Upstream 100 bases:

>100_bases
CTGAAATTGCAGCTGCACTATCTATTATATTAGCGATTATCTTACTGATTAATATGATCATCAATGACTGGCTGACAGGC
AGGATGAGGAGAGATGCACA

Downstream 100 bases:

>100_bases
TAATTTAATAAAGCAGTTTGGCGGTAAAGAAGTATTGAAGGCATTAGATGTTTCGATTGAAAAAGGAAGTTTAACAACCT
TGCTCGGACCAAGTGGGTGC

Product: hypothetical protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Permease Of ABC Transporter; Spermidine/Putrescine ABC Transporter Permease Protein; Transmembrane Component Of ABC Transporter; ABC Spermidine/Putrescine Transporter Permease Protein; ABC Transporter Membrane Protein; ABC Transporter; ABC-Type Transporter Permease Component; Spermidine/Putrescine ABC Transporter Membrane Protein; ABC Transporter Membrane Spanning Protein; Polyamine ABC Transporter Permease Protein; Spermidine/Putrescine ABC Transporter Permease PotC; Polyamine Transport Protein PotC; Spermidine/Putrescine ABC Transporter Permease; Polyamine ABC Transporter Membrane Protein; Spermidine/Putrescine ABC Transporter; Spermidine/Putrescine Transport System Permease Protein; ABC Transporter Inner Membrane Subunit; ABC Polyamine Transporter Inner Membrane Subunit; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; Ornithine Carbamoyltransferase; Abc Transporter Permease Fn; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; Permease Component Of ABC Transporter

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKSVVKNLSLMFICLYLAIPLLATFLYSISTDWSRSILPEGITFKWYGELFTNNDFLHAMINSLILVGGVTIAAVIIMVP
AIYGIVLYFPKLERFIKWAIIGVYTMPGIISSVGLLKAYSNSSIPMVFIVAGAYLVSILPFMYQGIRNNMRNINVVQLVE
AAEILGATKMQAFQKIILPNILPGVIVSALLSFSLLFGEFVMINILLGSNFKTVQIFLMENLQKNGHLSSAIVACYFVLL
AVVTFIILKLTMHKGVKKHELHSN

Sequences:

>Translated_264_residues
MKSVVKNLSLMFICLYLAIPLLATFLYSISTDWSRSILPEGITFKWYGELFTNNDFLHAMINSLILVGGVTIAAVIIMVP
AIYGIVLYFPKLERFIKWAIIGVYTMPGIISSVGLLKAYSNSSIPMVFIVAGAYLVSILPFMYQGIRNNMRNINVVQLVE
AAEILGATKMQAFQKIILPNILPGVIVSALLSFSLLFGEFVMINILLGSNFKTVQIFLMENLQKNGHLSSAIVACYFVLL
AVVTFIILKLTMHKGVKKHELHSN
>Mature_264_residues
MKSVVKNLSLMFICLYLAIPLLATFLYSISTDWSRSILPEGITFKWYGELFTNNDFLHAMINSLILVGGVTIAAVIIMVP
AIYGIVLYFPKLERFIKWAIIGVYTMPGIISSVGLLKAYSNSSIPMVFIVAGAYLVSILPFMYQGIRNNMRNINVVQLVE
AAEILGATKMQAFQKIILPNILPGVIVSALLSFSLLFGEFVMINILLGSNFKTVQIFLMENLQKNGHLSSAIVACYFVLL
AVVTFIILKLTMHKGVKKHELHSN

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29346; Mature: 29346

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVVKNLSLMFICLYLAIPLLATFLYSISTDWSRSILPEGITFKWYGELFTNNDFLHAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHCCCCHHHHH
INSLILVGGVTIAAVIIMVPAIYGIVLYFPKLERFIKWAIIGVYTMPGIISSVGLLKAYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSSIPMVFIVAGAYLVSILPFMYQGIRNNMRNINVVQLVEAAEILGATKMQAFQKIILPN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPGVIVSALLSFSLLFGEFVMINILLGSNFKTVQIFLMENLQKNGHLSSAIVACYFVLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AVVTFIILKLTMHKGVKKHELHSN
HHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MKSVVKNLSLMFICLYLAIPLLATFLYSISTDWSRSILPEGITFKWYGELFTNNDFLHAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHCCCCHHHHH
INSLILVGGVTIAAVIIMVPAIYGIVLYFPKLERFIKWAIIGVYTMPGIISSVGLLKAYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSSIPMVFIVAGAYLVSILPFMYQGIRNNMRNINVVQLVEAAEILGATKMQAFQKIILPN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPGVIVSALLSFSLLFGEFVMINILLGSNFKTVQIFLMENLQKNGHLSSAIVACYFVLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AVVTFIILKLTMHKGVKKHELHSN
HHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA