| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is yegV [H]
Identifier: 222150582
GI number: 222150582
Start: 348223
End: 349152
Strand: Direct
Name: yegV [H]
Synonym: MCCL_0332
Alternate gene names: 222150582
Gene position: 348223-349152 (Clockwise)
Preceding gene: 222150581
Following gene: 222150583
Centisome position: 16.56
GC content: 43.76
Gene sequence:
>930_bases TTGATAAGTAGTATAATGAAAGAAAAACTTATGAGGTGTGCTATGGACAAATGCTTAATTATTGGATCAACAGTCTGTGA CGTAGTGATTAATGTAGATCAGCTACCGACGACAGCAGGTGACGTACATATATCAAATCAGACGATGGCACTTGGTGGAT GTGCATACAATGTAGTGTCAGTATTACATCATCTAGGTGTGCCTTATACATTTGTATCCCCTGTGGGCACAGGAATGTAT GGGGAGTTTGTCGCACGCGAACTGGAGAAGCAAGGGATACAAACTGAAGTACGCATTGAGGGAGAGAACGGATGCTGCTA TTGTTTCGTTGAACATCACGGCGAACGTACATTTATGTCGCATCACGGTGTAGAGTATACGTTTAATCCACAGTGGTTAG ATGGTTTGAATTTAGATGATTACAAGTATGTTTATATATGCGGGCTAGAAGTCGAAGAACGTGATGGAGAGCAGTTGATT GATACGTTAAGCAATGTTGATGCAACAATCATCTTCGCACCAGGACCACGTGGGAACTTGATTCTTCAAGAACGTATGGA ACGCGTGTATCAACTCTCACCGATCGTACACTTGAATGAACAGGAGATTAAGGAGCAGACAGGGTGTGATACGGTTGAAG CGGCACTTGAAGTATTGTATGAGAAGACACACAACAAGATTGTCGTAACACAAGGAGAGCAAGGTGCAATGACATATGAC GGTACAATCACGCATGTGCCGGGAGAAAGCGTGAGAGTTAAAGATACGATTGGTGCTGGAGACAGCCATGCAGGTGCATT TATATCGAGCCTTGCTAAAGGAATGGATGACAAATCTGCACTGACATTCGCAAACAAAGTCGCAGGGGAAGTTGTACAGG TGAGTGGGGTTGGATTGAGTGATGAGGTGTGGGGAAGGTTGAAGTTCTAA
Upstream 100 bases:
>100_bases ACAAATGATATTTGGGAAATAATATGAAAATGCTGCAGTGTCTATGCTATAGATCTGCAGCATTTTCAATATATATGATT TGCAGAGGCCATCTTAAAAT
Downstream 100 bases:
>100_bases AATCATGTGATTAAATAAGCTTGAAATGAAATGTTTCTGGCCTTATATAGATTCATATGATGTTACCCCACATAAATTAT ATTTGGATTATGATAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MISSIMKEKLMRCAMDKCLIIGSTVCDVVINVDQLPTTAGDVHISNQTMALGGCAYNVVSVLHHLGVPYTFVSPVGTGMY GEFVARELEKQGIQTEVRIEGENGCCYCFVEHHGERTFMSHHGVEYTFNPQWLDGLNLDDYKYVYICGLEVEERDGEQLI DTLSNVDATIIFAPGPRGNLILQERMERVYQLSPIVHLNEQEIKEQTGCDTVEAALEVLYEKTHNKIVVTQGEQGAMTYD GTITHVPGESVRVKDTIGAGDSHAGAFISSLAKGMDDKSALTFANKVAGEVVQVSGVGLSDEVWGRLKF
Sequences:
>Translated_309_residues MISSIMKEKLMRCAMDKCLIIGSTVCDVVINVDQLPTTAGDVHISNQTMALGGCAYNVVSVLHHLGVPYTFVSPVGTGMY GEFVARELEKQGIQTEVRIEGENGCCYCFVEHHGERTFMSHHGVEYTFNPQWLDGLNLDDYKYVYICGLEVEERDGEQLI DTLSNVDATIIFAPGPRGNLILQERMERVYQLSPIVHLNEQEIKEQTGCDTVEAALEVLYEKTHNKIVVTQGEQGAMTYD GTITHVPGESVRVKDTIGAGDSHAGAFISSLAKGMDDKSALTFANKVAGEVVQVSGVGLSDEVWGRLKF >Mature_309_residues MISSIMKEKLMRCAMDKCLIIGSTVCDVVINVDQLPTTAGDVHISNQTMALGGCAYNVVSVLHHLGVPYTFVSPVGTGMY GEFVARELEKQGIQTEVRIEGENGCCYCFVEHHGERTFMSHHGVEYTFNPQWLDGLNLDDYKYVYICGLEVEERDGEQLI DTLSNVDATIIFAPGPRGNLILQERMERVYQLSPIVHLNEQEIKEQTGCDTVEAALEVLYEKTHNKIVVTQGEQGAMTYD GTITHVPGESVRVKDTIGAGDSHAGAFISSLAKGMDDKSALTFANKVAGEVVQVSGVGLSDEVWGRLKF
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI5670342, Length=306, Percent_Identity=25.4901960784314, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4557693, Length=306, Percent_Identity=25.1633986928105, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI11545855, Length=290, Percent_Identity=25.8620689655172, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1788417, Length=281, Percent_Identity=32.7402135231317, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI87082343, Length=278, Percent_Identity=26.2589928057554, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790193, Length=268, Percent_Identity=26.865671641791, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI87081971, Length=309, Percent_Identity=25.8899676375405, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 33915; Mature: 33915
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSIMKEKLMRCAMDKCLIIGSTVCDVVINVDQLPTTAGDVHISNQTMALGGCAYNVVS CCHHHHHHHHHHHHHHHHEEECCHHHHHEECCCCCCCCCCCEEECCCEEEECHHHHHHHH VLHHLGVPYTFVSPVGTGMYGEFVARELEKQGIQTEVRIEGENGCCYCFVEHHGERTFMS HHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCEEEHH HHGVEYTFNPQWLDGLNLDDYKYVYICGLEVEERDGEQLIDTLSNVDATIIFAPGPRGNL HCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCC ILQERMERVYQLSPIVHLNEQEIKEQTGCDTVEAALEVLYEKTHNKIVVTQGEQGAMTYD HHHHHHHHHHHHCCEEECCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEC GTITHVPGESVRVKDTIGAGDSHAGAFISSLAKGMDDKSALTFANKVAGEVVQVSGVGLS CEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCC DEVWGRLKF HHHHCEECC >Mature Secondary Structure MISSIMKEKLMRCAMDKCLIIGSTVCDVVINVDQLPTTAGDVHISNQTMALGGCAYNVVS CCHHHHHHHHHHHHHHHHEEECCHHHHHEECCCCCCCCCCCEEECCCEEEECHHHHHHHH VLHHLGVPYTFVSPVGTGMYGEFVARELEKQGIQTEVRIEGENGCCYCFVEHHGERTFMS HHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCEEEHH HHGVEYTFNPQWLDGLNLDDYKYVYICGLEVEERDGEQLIDTLSNVDATIIFAPGPRGNL HCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCC ILQERMERVYQLSPIVHLNEQEIKEQTGCDTVEAALEVLYEKTHNKIVVTQGEQGAMTYD HHHHHHHHHHHHCCEEECCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEC GTITHVPGESVRVKDTIGAGDSHAGAFISSLAKGMDDKSALTFANKVAGEVVQVSGVGLS CEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCC DEVWGRLKF HHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]