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The map label for this gene is ypfJ [H]

Identifier: 222150562

GI number: 222150562

Start: 319358

End: 320296

Strand: Direct

Name: ypfJ [H]

Synonym: MCCL_0312

Alternate gene names: 222150562

Gene position: 319358-320296 (Clockwise)

Preceding gene: 222150561

Following gene: 222150563

Centisome position: 15.19

GC content: 42.92

Gene sequence:

>939_bases
ATGAAATGGCAAGGTAGACAGGGGAGTTCTAATGTAGAAGATGCGAGAGGCCCTGGTGGCTTTTCTGGTGGCAGCCCGAT
GGTTATCGGTGGCGGTGGTATGGGATGTTTAGGAATCATCGTCATGATCATTATCGTATTGATGGGTGGAAACCCAATGG
ATTATATGGGCGGCGAAAGTCAATCTACGCAAACGCAGAATCAGCAACAAAATAATGGCAACAATGATGTATTTGATACT
GGGAATGTTAAGACGGATGCCGGGAACGATGGCGCTGCGACAGAACAATCTTTAGATGAACGTGGACAGTTTGCATCAGT
GGTACTGAAAGATACGGAAGACGTCTGGCATAAGATATTCCAGGATTATGATAAATCGTATACTGAACCGAGGATGGTAT
TATATTCAGATGCAGTACGTTCAGGGTGTGGACAAGCAAGTGCTCAAATGGGACCGTTCTATTGTCCGGTTGATCAGAAG
ATTTATATCGACCTATCTTTTATGGACGAACTGGATCAGAAGTTTGATGCGCCTGGAGATTTCGCGATGGCTTATGTTAT
TGCACATGAAGTTGGACATCACGTGCAGAATGAACTTGGTATCTTACCGAAATTCCATCAGTTAAGAAATCAATTATCTG
AAACTGAGTACAACAAATATTCTGTTGCTGTTGAGCTACAAGCAGACTATTTTGCGGGTGTTTATGCAAAGCACGCACAA
GAAATGGGTTATACAGATGATGGAGATTTAGAAGAAGCGATTAAAGCAGCCCATGCAGTTGGAGACGACACAATTCAGAA
GAATGCATTAGGACGTGCAAATCCTGATACTTTTACACATGGTTCTAGTGCGGAACGTATGGACTGGTTCAAGCGAGGAT
ATGAAGCAGGAGACTTTAGCCAGGGGAATACATTTAAAGCAAGAGGTTTAGACTTTTAA

Upstream 100 bases:

>100_bases
CCAATCTCATTTTTTAATGTTTCCATAAATAAATGATTGTGCGCATTGAAATTTGGGTAATGATATTTAAGATAATAAGG
GCCTATGAGGAGGAAGACGT

Downstream 100 bases:

>100_bases
ATAATGGAAAATGAGATATACTCTTCTATAAGGGTATATCTCATTTTGATAAGCGCCCATTAACGTAAAGGATTGATAGA
TTGTGAAACTAAAGAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKWQGRQGSSNVEDARGPGGFSGGSPMVIGGGGMGCLGIIVMIIIVLMGGNPMDYMGGESQSTQTQNQQQNNGNNDVFDT
GNVKTDAGNDGAATEQSLDERGQFASVVLKDTEDVWHKIFQDYDKSYTEPRMVLYSDAVRSGCGQASAQMGPFYCPVDQK
IYIDLSFMDELDQKFDAPGDFAMAYVIAHEVGHHVQNELGILPKFHQLRNQLSETEYNKYSVAVELQADYFAGVYAKHAQ
EMGYTDDGDLEEAIKAAHAVGDDTIQKNALGRANPDTFTHGSSAERMDWFKRGYEAGDFSQGNTFKARGLDF

Sequences:

>Translated_312_residues
MKWQGRQGSSNVEDARGPGGFSGGSPMVIGGGGMGCLGIIVMIIIVLMGGNPMDYMGGESQSTQTQNQQQNNGNNDVFDT
GNVKTDAGNDGAATEQSLDERGQFASVVLKDTEDVWHKIFQDYDKSYTEPRMVLYSDAVRSGCGQASAQMGPFYCPVDQK
IYIDLSFMDELDQKFDAPGDFAMAYVIAHEVGHHVQNELGILPKFHQLRNQLSETEYNKYSVAVELQADYFAGVYAKHAQ
EMGYTDDGDLEEAIKAAHAVGDDTIQKNALGRANPDTFTHGSSAERMDWFKRGYEAGDFSQGNTFKARGLDF
>Mature_312_residues
MKWQGRQGSSNVEDARGPGGFSGGSPMVIGGGGMGCLGIIVMIIIVLMGGNPMDYMGGESQSTQTQNQQQNNGNNDVFDT
GNVKTDAGNDGAATEQSLDERGQFASVVLKDTEDVWHKIFQDYDKSYTEPRMVLYSDAVRSGCGQASAQMGPFYCPVDQK
IYIDLSFMDELDQKFDAPGDFAMAYVIAHEVGHHVQNELGILPKFHQLRNQLSETEYNKYSVAVELQADYFAGVYAKHAQ
EMGYTDDGDLEEAIKAAHAVGDDTIQKNALGRANPDTFTHGSSAERMDWFKRGYEAGDFSQGNTFKARGLDF

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=308, Percent_Identity=43.5064935064935, Blast_Score=252, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 34146; Mature: 34146

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQGRQGSSNVEDARGPGGFSGGSPMVIGGGGMGCLGIIVMIIIVLMGGNPMDYMGGES
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCCC
QSTQTQNQQQNNGNNDVFDTGNVKTDAGNDGAATEQSLDERGQFASVVLKDTEDVWHKIF
CCHHHHHHHHCCCCCCCEECCCEECCCCCCCCHHHHHHHHCCCEEHHHHHCCHHHHHHHH
QDYDKSYTEPRMVLYSDAVRSGCGQASAQMGPFYCPVDQKIYIDLSFMDELDQKFDAPGD
HHHHHCCCCCCEEEHHHHHHHCCCCCHHCCCCEECCCCCEEEEEEHHHHHHHHHHCCCCH
FAMAYVIAHEVGHHVQNELGILPKFHQLRNQLSETEYNKYSVAVELQADYFAGVYAKHAQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHH
EMGYTDDGDLEEAIKAAHAVGDDTIQKNALGRANPDTFTHGSSAERMDWFKRGYEAGDFS
HCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
QGNTFKARGLDF
CCCCCCCCCCCC
>Mature Secondary Structure
MKWQGRQGSSNVEDARGPGGFSGGSPMVIGGGGMGCLGIIVMIIIVLMGGNPMDYMGGES
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCCC
QSTQTQNQQQNNGNNDVFDTGNVKTDAGNDGAATEQSLDERGQFASVVLKDTEDVWHKIF
CCHHHHHHHHCCCCCCCEECCCEECCCCCCCCHHHHHHHHCCCEEHHHHHCCHHHHHHHH
QDYDKSYTEPRMVLYSDAVRSGCGQASAQMGPFYCPVDQKIYIDLSFMDELDQKFDAPGD
HHHHHCCCCCCEEEHHHHHHHCCCCCHHCCCCEECCCCCEEEEEEHHHHHHHHHHCCCCH
FAMAYVIAHEVGHHVQNELGILPKFHQLRNQLSETEYNKYSVAVELQADYFAGVYAKHAQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHH
EMGYTDDGDLEEAIKAAHAVGDDTIQKNALGRANPDTFTHGSSAERMDWFKRGYEAGDFS
HCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
QGNTFKARGLDF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]