| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150560
Identifier: 222150560
GI number: 222150560
Start: 316717
End: 317895
Strand: Direct
Name: 222150560
Synonym: MCCL_0310
Alternate gene names: NA
Gene position: 316717-317895 (Clockwise)
Preceding gene: 222150559
Following gene: 222150561
Centisome position: 15.07
GC content: 38.42
Gene sequence:
>1179_bases ATGGAAAAGCACTTAAAAAAATATCACCATCATCAACTATTAAACCATATGGAGTTATTGTCTCAAGTTGAAAAACAAAG ACTAGAAGAAACGTTATCCATTCAAGATTTTGAAAAGATAGATCAGTTGTATCAAGATGTCTATGTTCATCGACAGATTG CGCTTCCGGAAGATGTTCAAGATATCGCAACAACCATTATTAGTGAGCAATCAACAGAAGCGCTGGCACATATGGAGGCA TTAGGGCAAAGTGCTATTAAAGCTGGCAAGTTTGCCGCAGTTCTAATGGCTGGTGGACAAGGTACACGTCTCGCGCATAA TGGGCCGAAAGGTACATTTGAATTTGATGGTGTGAGTCTGTTTGAACTTCAGGCAAGACAAATAAAAGCATTGATTGAAA GCTTGAACGTGTCAATACCTTGGGTCATTATGACAAGTGATATTAACCATAAAGAAACAATCGCTTTCTTTGAAGCGCAT GATTATTTCGGATTAGATAAACAGGATGTCTTTTTCTTCATTCAACCTAATATTGTAGCATTGAGTGAAGGTGGAGAGCT ATTACTCAATGAGGACAAACAGCTGCTGACAACACCGAACGGTAACGGTGGAATCTTTGAAGCATTGAATGCATCAGGTA CGAATAAGCTGTTACAAGAAAGAGGCGTTACACACATTTACATGAATAATATCGATAATGTACTCGTAAAAGTGCTGGAC CCGGTACTTTGTGGCTATGCAGTTGAAAGTGACGCAGATGTTACAACGAAGACGATTGCAGCAAAAGATAATGAAAGTGT CGGCCGCGTTGTGGAAGTGAATGGGAAAAAACAAGTCATTGAATACACTGAGCTTCCTAAAGGAGAAGAGAATCATTTCC GTAATGCGAATATCGGAATTCATATATTTAAGCTTGATTTCATTGTGAATCATGCACAAAGTGAAATGCCTTATCACCTG GCGATTAAACAGCTGCCGCAGTTAGATGAGAGTTTTACTGTTATTGAAGCTACAGCATTAAAGTTTGAGAAGTTCTACTT TGATATATTCAAATATGCGGATACTTTTAAGACGGTACAGTTTGATCGTAATGAAGAGTTCAGTCCTTTGAAGAATAAAG AAGGAAAAGATAGCATCGCAACAGCTTACGAAGATTTGTTGCGCACACATCGACTATAA
Upstream 100 bases:
>100_bases TTCGCTTGCAACGGCATTCAGTCTTGTAACAATGTATATTGTCTATAATGAGATTATCCACAGAACGATAAGTTGGATAA AATATTAAAGGAGTTTTATT
Downstream 100 bases:
>100_bases GAGGTGACCGATTTGAAAAATAAAACAACAATCTATGTGATGTTCATGATGCTTTTGATTGCAGCGATAAATCTTGGACT TAGTTATCATTATATATTTA
Product: hypothetical protein
Products: diphosphate; UDP-N-acetyl-D-glucosamine
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MEKHLKKYHHHQLLNHMELLSQVEKQRLEETLSIQDFEKIDQLYQDVYVHRQIALPEDVQDIATTIISEQSTEALAHMEA LGQSAIKAGKFAAVLMAGGQGTRLAHNGPKGTFEFDGVSLFELQARQIKALIESLNVSIPWVIMTSDINHKETIAFFEAH DYFGLDKQDVFFFIQPNIVALSEGGELLLNEDKQLLTTPNGNGGIFEALNASGTNKLLQERGVTHIYMNNIDNVLVKVLD PVLCGYAVESDADVTTKTIAAKDNESVGRVVEVNGKKQVIEYTELPKGEENHFRNANIGIHIFKLDFIVNHAQSEMPYHL AIKQLPQLDESFTVIEATALKFEKFYFDIFKYADTFKTVQFDRNEEFSPLKNKEGKDSIATAYEDLLRTHRL
Sequences:
>Translated_392_residues MEKHLKKYHHHQLLNHMELLSQVEKQRLEETLSIQDFEKIDQLYQDVYVHRQIALPEDVQDIATTIISEQSTEALAHMEA LGQSAIKAGKFAAVLMAGGQGTRLAHNGPKGTFEFDGVSLFELQARQIKALIESLNVSIPWVIMTSDINHKETIAFFEAH DYFGLDKQDVFFFIQPNIVALSEGGELLLNEDKQLLTTPNGNGGIFEALNASGTNKLLQERGVTHIYMNNIDNVLVKVLD PVLCGYAVESDADVTTKTIAAKDNESVGRVVEVNGKKQVIEYTELPKGEENHFRNANIGIHIFKLDFIVNHAQSEMPYHL AIKQLPQLDESFTVIEATALKFEKFYFDIFKYADTFKTVQFDRNEEFSPLKNKEGKDSIATAYEDLLRTHRL >Mature_392_residues MEKHLKKYHHHQLLNHMELLSQVEKQRLEETLSIQDFEKIDQLYQDVYVHRQIALPEDVQDIATTIISEQSTEALAHMEA LGQSAIKAGKFAAVLMAGGQGTRLAHNGPKGTFEFDGVSLFELQARQIKALIESLNVSIPWVIMTSDINHKETIAFFEAH DYFGLDKQDVFFFIQPNIVALSEGGELLLNEDKQLLTTPNGNGGIFEALNASGTNKLLQERGVTHIYMNNIDNVLVKVLD PVLCGYAVESDADVTTKTIAAKDNESVGRVVEVNGKKQVIEYTELPKGEENHFRNANIGIHIFKLDFIVNHAQSEMPYHL AIKQLPQLDESFTVIEATALKFEKFYFDIFKYADTFKTVQFDRNEEFSPLKNKEGKDSIATAYEDLLRTHRL
Specific function: Unknown
COG id: COG4284
COG function: function code G; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 1 family [H]
Homologues:
Organism=Homo sapiens, GI156627575, Length=425, Percent_Identity=32.4705882352941, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI187936958, Length=351, Percent_Identity=33.6182336182336, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17552518, Length=418, Percent_Identity=32.5358851674641, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI193206427, Length=337, Percent_Identity=32.9376854599407, Blast_Score=166, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320100, Length=401, Percent_Identity=33.1670822942643, Blast_Score=202, Evalue=1e-52, Organism=Drosophila melanogaster, GI19920822, Length=352, Percent_Identity=35.7954545454545, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24582229, Length=352, Percent_Identity=36.0795454545455, Blast_Score=202, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002618 [H]
Pfam domain/function: PF01704 UDPGP [H]
EC number: 2.7.7.23
Molecular weight: Translated: 44369; Mature: 44369
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKHLKKYHHHQLLNHMELLSQVEKQRLEETLSIQDFEKIDQLYQDVYVHRQIALPEDVQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHH DIATTIISEQSTEALAHMEALGQSAIKAGKFAAVLMAGGQGTRLAHNGPKGTFEFDGVSL HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCEEECCEEH FELQARQIKALIESLNVSIPWVIMTSDINHKETIAFFEAHDYFGLDKQDVFFFIQPNIVA HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEE LSEGGELLLNEDKQLLTTPNGNGGIFEALNASGTNKLLQERGVTHIYMNNIDNVLVKVLD ECCCCCEEECCCCEEEECCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHHHHH PVLCGYAVESDADVTTKTIAAKDNESVGRVVEVNGKKQVIEYTELPKGEENHFRNANIGI HHHHCCEECCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEHHCCCCCCCCCCCCCCCEE HIFKLDFIVNHAQSEMPYHLAIKQLPQLDESFTVIEATALKFEKFYFDIFKYADTFKTVQ EEEEEEEHHHHHHHCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEE FDRNEEFSPLKNKEGKDSIATAYEDLLRTHRL ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKHLKKYHHHQLLNHMELLSQVEKQRLEETLSIQDFEKIDQLYQDVYVHRQIALPEDVQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHH DIATTIISEQSTEALAHMEALGQSAIKAGKFAAVLMAGGQGTRLAHNGPKGTFEFDGVSL HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCEEECCEEH FELQARQIKALIESLNVSIPWVIMTSDINHKETIAFFEAHDYFGLDKQDVFFFIQPNIVA HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEE LSEGGELLLNEDKQLLTTPNGNGGIFEALNASGTNKLLQERGVTHIYMNNIDNVLVKVLD ECCCCCEEECCCCEEEECCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHHHHH PVLCGYAVESDADVTTKTIAAKDNESVGRVVEVNGKKQVIEYTELPKGEENHFRNANIGI HHHHCCEECCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEHHCCCCCCCCCCCCCCCEE HIFKLDFIVNHAQSEMPYHLAIKQLPQLDESFTVIEATALKFEKFYFDIFKYADTFKTVQ EEEEEEEHHHHHHHCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEE FDRNEEFSPLKNKEGKDSIATAYEDLLRTHRL ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UTP; N-acetyl-alpha-D-glucosamine 1-phosphate
Specific reaction: UTP + N-acetyl-alpha-D-glucosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-glucosamine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA