| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is brnQ [H]
Identifier: 222150300
GI number: 222150300
Start: 52478
End: 53848
Strand: Direct
Name: brnQ [H]
Synonym: MCCL_0050
Alternate gene names: 222150300
Gene position: 52478-53848 (Clockwise)
Preceding gene: 222150299
Following gene: 222150302
Centisome position: 2.5
GC content: 34.35
Gene sequence:
>1371_bases ATGATTATTAACGCTAAAACGAAATTAACATTTAAAGAGAATATGTTTATCGGATCAATGCTGTTTGGACTATTCTTCGG GGCTGGAAATTTAATTTTCCCGATTCATTTCGGTCAAACAGCAGGTAGCAATGTATGGCTTACAAACTTAGGATTTCTCA TTACTGCGATTGGTTTACCATTCTTAGGTATAATCGCCATTGGTATATCTAAAACAAATGGTGTATTTGATATTTCAAAT CGAGTCAACCGTTCATATGCATACATATTCACGATTCTTCTATATTTAGTTATTGGTCCATTATTTGCGTTGCCAAGGCT TGCAACAACGTCGTTTGAAATTGGTTTTTCTTCATACGTGACAGAACAAAATGGAAAATTGTTTTTATTTATTTTTAGTT TATTATTCTTTTTAGTTGCATGGATGTTCTCACGTAAACCTTCTAAAATATTGGATTATATCGGTAAATTCTTAAATCCT GTCTTTTTATTTCTTTTAGGGGTTTTAATGTTACTTGCATTTATTAAACCGATGGGAAGCATTGGAAGCGCACCTATACA GGCCGACTATCAATCCAACGCCGTACTTAAAGGTTTTATCGATGGCTACAACACATTAGACGCGCTCGCTTCACTTGCAT TTGGTATTATTATTGTAACGACAATTAAGAAATTAGGGATTACAAACCCTGCACATATTGCGAAAGAAACGGTGAAATCT GGATTTATCAGTATTATTCTTATGGGATTAATCTATACATTACTTGCCCTTATGGGAACGATGAGTTTAGGTCAATTTAA AGTGAGTGAGAACGGTGGGATTGCATTAGCTCAAATTGCACACTACTATTTAGGTGATTACGGTATTATTCTATTATCTT TAATCATTATTGTAGCTTGTTTAAAGACAGCAATTGGCTTAATTACAGCATTCTCAGAAACATTTACAGAATTATTCCCG AAACGTAACTATTTAATGTTTGCAACAGTTGTGAGTATCGTTTCATTCGTCATTGCTAATGTGGGATTAACAAAGATAAT TACATATTCTATACCAGTATTAATGTTTTTGTATCCATTAGCGATCACGCTTATTTTACTGACATTATTCAGTAAGTATT TTAATCATTCACGTACAGTTTATCAATTTACAACGTACTTTACGATGATTGCAGCGTTTGTGGATGGTTTAAAAGCAAGT CCGGAGTTTATTGCGAATACAGCATTCGTGAAAGGGGTCGTGAACTTTGGAGATCACTATTTGCCCCTCTCCTCGATTGG GATGGGATGGGTATTGCCGGCAGTAATCGGATTTGTGATCGGATATATTATTTATTTAGCAAGAGAGAAGAATACAGTTA CAGAAGCTTAA
Upstream 100 bases:
>100_bases AATAAAGTAAATATAATTTTTTAATTAATCAGAAAATTCATATACTCAAACATACTTTAAAGTGATATAATTAAAAACTA AATTCACAATGAAGGAGTGT
Downstream 100 bases:
>100_bases TATTTCACGTAAAACACCTTACAGGAAATCTGTAAGGTGTTTTATCGACTTCGCTTTTAAATTATTAATCACCAATAACA GTAAGTTCAACATCAATAGA
Product: branched-chain amino acid transporter carrier protein
Products: L-leucine [Cytoplasm]; L-valine [Cytoplasm]; Na (I) [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: Branched-chain amino acid uptake carrier [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MIINAKTKLTFKENMFIGSMLFGLFFGAGNLIFPIHFGQTAGSNVWLTNLGFLITAIGLPFLGIIAIGISKTNGVFDISN RVNRSYAYIFTILLYLVIGPLFALPRLATTSFEIGFSSYVTEQNGKLFLFIFSLLFFLVAWMFSRKPSKILDYIGKFLNP VFLFLLGVLMLLAFIKPMGSIGSAPIQADYQSNAVLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPAHIAKETVKS GFISIILMGLIYTLLALMGTMSLGQFKVSENGGIALAQIAHYYLGDYGIILLSLIIIVACLKTAIGLITAFSETFTELFP KRNYLMFATVVSIVSFVIANVGLTKIITYSIPVLMFLYPLAITLILLTLFSKYFNHSRTVYQFTTYFTMIAAFVDGLKAS PEFIANTAFVKGVVNFGDHYLPLSSIGMGWVLPAVIGFVIGYIIYLAREKNTVTEA
Sequences:
>Translated_456_residues MIINAKTKLTFKENMFIGSMLFGLFFGAGNLIFPIHFGQTAGSNVWLTNLGFLITAIGLPFLGIIAIGISKTNGVFDISN RVNRSYAYIFTILLYLVIGPLFALPRLATTSFEIGFSSYVTEQNGKLFLFIFSLLFFLVAWMFSRKPSKILDYIGKFLNP VFLFLLGVLMLLAFIKPMGSIGSAPIQADYQSNAVLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPAHIAKETVKS GFISIILMGLIYTLLALMGTMSLGQFKVSENGGIALAQIAHYYLGDYGIILLSLIIIVACLKTAIGLITAFSETFTELFP KRNYLMFATVVSIVSFVIANVGLTKIITYSIPVLMFLYPLAITLILLTLFSKYFNHSRTVYQFTTYFTMIAAFVDGLKAS PEFIANTAFVKGVVNFGDHYLPLSSIGMGWVLPAVIGFVIGYIIYLAREKNTVTEA >Mature_456_residues MIINAKTKLTFKENMFIGSMLFGLFFGAGNLIFPIHFGQTAGSNVWLTNLGFLITAIGLPFLGIIAIGISKTNGVFDISN RVNRSYAYIFTILLYLVIGPLFALPRLATTSFEIGFSSYVTEQNGKLFLFIFSLLFFLVAWMFSRKPSKILDYIGKFLNP VFLFLLGVLMLLAFIKPMGSIGSAPIQADYQSNAVLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPAHIAKETVKS GFISIILMGLIYTLLALMGTMSLGQFKVSENGGIALAQIAHYYLGDYGIILLSLIIIVACLKTAIGLITAFSETFTELFP KRNYLMFATVVSIVSFVIANVGLTKIITYSIPVLMFLYPLAITLILLTLFSKYFNHSRTVYQFTTYFTMIAAFVDGLKAS PEFIANTAFVKGVVNFGDHYLPLSSIGMGWVLPAVIGFVIGYIIYLAREKNTVTEA
Specific function: Component of the transport system for branched-chain amino acids (leucine, isoleucine and valine) Which is coupled to a proton motive force [H]
COG id: COG1114
COG function: function code E; Branched-chain amino acid permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the branched chain amino acid transporter family [H]
Homologues:
Organism=Escherichia coli, GI1786601, Length=452, Percent_Identity=34.2920353982301, Blast_Score=244, Evalue=6e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004685 [H]
Pfam domain/function: PF05525 Branch_AA_trans [H]
EC number: NA
Molecular weight: Translated: 50086; Mature: 50086
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINAKTKLTFKENMFIGSMLFGLFFGAGNLIFPIHFGQTAGSNVWLTNLGFLITAIGLP CEECCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHH FLGIIAIGISKTNGVFDISNRVNRSYAYIFTILLYLVIGPLFALPRLATTSFEIGFSSYV HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHH TEQNGKLFLFIFSLLFFLVAWMFSRKPSKILDYIGKFLNPVFLFLLGVLMLLAFIKPMGS CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IGSAPIQADYQSNAVLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPAHIAKETVKS CCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GFISIILMGLIYTLLALMGTMSLGQFKVSENGGIALAQIAHYYLGDYGIILLSLIIIVAC HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKTAIGLITAFSETFTELFPKRNYLMFATVVSIVSFVIANVGLTKIITYSIPVLMFLYPL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AITLILLTLFSKYFNHSRTVYQFTTYFTMIAAFVDGLKASPEFIANTAFVKGVVNFGDHY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC LPLSSIGMGWVLPAVIGFVIGYIIYLAREKNTVTEA CCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIINAKTKLTFKENMFIGSMLFGLFFGAGNLIFPIHFGQTAGSNVWLTNLGFLITAIGLP CEECCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHH FLGIIAIGISKTNGVFDISNRVNRSYAYIFTILLYLVIGPLFALPRLATTSFEIGFSSYV HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHH TEQNGKLFLFIFSLLFFLVAWMFSRKPSKILDYIGKFLNPVFLFLLGVLMLLAFIKPMGS CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IGSAPIQADYQSNAVLKGFIDGYNTLDALASLAFGIIIVTTIKKLGITNPAHIAKETVKS CCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GFISIILMGLIYTLLALMGTMSLGQFKVSENGGIALAQIAHYYLGDYGIILLSLIIIVAC HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKTAIGLITAFSETFTELFPKRNYLMFATVVSIVSFVIANVGLTKIITYSIPVLMFLYPL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AITLILLTLFSKYFNHSRTVYQFTTYFTMIAAFVDGLKASPEFIANTAFVKGVVNFGDHY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC LPLSSIGMGWVLPAVIGFVIGYIIYLAREKNTVTEA CCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-leucine [Periplasm]; L-valine [Periplasm]; Na (I) [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-leucine [Periplasm] = Na (I) [Cytoplasm] + L-leucine [Cytoplasm] Na (I) [Periplasm] + L-valine [Periplasm] = Na (I) [Cytoplasm] + L-valine [Cytoplasm] Na (I) [Periplasm] + L-iso-leucine [Periplasm] = Na (I) [Cytoplasm] + L-iso-leuci
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8544834 [H]