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The map label for this gene is yfkM [H]

Identifier: 222150281

GI number: 222150281

Start: 36769

End: 37287

Strand: Direct

Name: yfkM [H]

Synonym: MCCL_0031

Alternate gene names: 222150281

Gene position: 36769-37287 (Clockwise)

Preceding gene: 222150280

Following gene: 222150282

Centisome position: 1.75

GC content: 35.45

Gene sequence:

>519_bases
ATGACTAAGAAAATCGCAGTAGTATTAGATAATTTATTTGAAGATATAGAATTTACGAGCCCGGCTGAGGCTTTTGAAAA
AGAAGGACATGAACTTACTGTTATTGGTAAAGAAGCTGGTAGTACAGTAAAAGGTAAACAAGGGAATACTGAAGTAACGA
TTGATAAAGCAATCGATGACGTTAAACCTGATGACTTCGATGCATTATTCATTCCAGGCGGATTCTCACCAGATATGTTA
CGTGGTGATGAGCAAGGACGATTCGGTGAATTTACAAAAGGATTTGTTTCTAATGAAAAACCTGTATTTGCAATCTGTCA
CGGACCACAGTTATTAATCGATACAGATTTATTAAAAGGTAAAAAGCTAACGGGTTACTTATCTGTACGTAAAGATTTAG
AGAATGCAGGTGCAACAGTAGTAGACGAATCAGTTGTTGTAGATAGTAGTATCGTAACATCACGTACACCTGATGACTTA
GAAGATTTTAATCGTGAATCATTAGCATTATTGAAATAG

Upstream 100 bases:

>100_bases
AGCAATATATTTTTAATGTGTATATATTAAAGGTAAAATAGAATTATAGTTCTCACATATTGATTACGAACTCACTATTG
AATTAGGAGGAATTTATATT

Downstream 100 bases:

>100_bases
AATATACACAAACACCTAGCATACTATAGACTTTATCATGAATGAAATTTCTAATTTGAGGAGGAGGTAGAAAAATGGTT
AATGTAGCGCTATTGGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: GSP18 [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTKKIAVVLDNLFEDIEFTSPAEAFEKEGHELTVIGKEAGSTVKGKQGNTEVTIDKAIDDVKPDDFDALFIPGGFSPDML
RGDEQGRFGEFTKGFVSNEKPVFAICHGPQLLIDTDLLKGKKLTGYLSVRKDLENAGATVVDESVVVDSSIVTSRTPDDL
EDFNRESLALLK

Sequences:

>Translated_172_residues
MTKKIAVVLDNLFEDIEFTSPAEAFEKEGHELTVIGKEAGSTVKGKQGNTEVTIDKAIDDVKPDDFDALFIPGGFSPDML
RGDEQGRFGEFTKGFVSNEKPVFAICHGPQLLIDTDLLKGKKLTGYLSVRKDLENAGATVVDESVVVDSSIVTSRTPDDL
EDFNRESLALLK
>Mature_171_residues
TKKIAVVLDNLFEDIEFTSPAEAFEKEGHELTVIGKEAGSTVKGKQGNTEVTIDKAIDDVKPDDFDALFIPGGFSPDMLR
GDEQGRFGEFTKGFVSNEKPVFAICHGPQLLIDTDLLKGKKLTGYLSVRKDLENAGATVVDESVVVDSSIVTSRTPDDLE
DFNRESLALLK

Specific function: Functions in the protection against aldehyde-stress, possibly by degrading damaged proteins [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=172, Percent_Identity=60.4651162790698, Blast_Score=204, Evalue=4e-54,
Organism=Drosophila melanogaster, GI28571932, Length=163, Percent_Identity=30.6748466257669, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 18753; Mature: 18622

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKIAVVLDNLFEDIEFTSPAEAFEKEGHELTVIGKEAGSTVKGKQGNTEVTIDKAIDD
CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCEECCCCCCCEEEEECHHCC
VKPDDFDALFIPGGFSPDMLRGDEQGRFGEFTKGFVSNEKPVFAICHGPQLLIDTDLLKG
CCCCCCCEEEECCCCCHHHHCCCCCCCCCCHHHHHCCCCCCEEEEECCCEEEEECCCCCC
KKLTGYLSVRKDLENAGATVVDESVVVDSSIVTSRTPDDLEDFNRESLALLK
CCEEEHHHHHHHHHHCCCEEECCCEEECCHHCCCCCCHHHHHCCCCCEEECC
>Mature Secondary Structure 
TKKIAVVLDNLFEDIEFTSPAEAFEKEGHELTVIGKEAGSTVKGKQGNTEVTIDKAIDD
CCHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCEECCCCCCCEEEEECHHCC
VKPDDFDALFIPGGFSPDMLRGDEQGRFGEFTKGFVSNEKPVFAICHGPQLLIDTDLLKG
CCCCCCCEEEECCCCCHHHHCCCCCCCCCCHHHHHCCCCCCEEEEECCCEEEEECCCCCC
KKLTGYLSVRKDLENAGATVVDESVVVDSSIVTSRTPDDLEDFNRESLALLK
CCEEEHHHHHHHHHHCCCEEECCCEEECCHHCCCCCCHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377; 9298659 [H]