| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150265
Identifier: 222150265
GI number: 222150265
Start: 18404
End: 19315
Strand: Direct
Name: 222150265
Synonym: MCCL_0015
Alternate gene names: NA
Gene position: 18404-19315 (Clockwise)
Preceding gene: 222150264
Following gene: 222150266
Centisome position: 0.88
GC content: 30.81
Gene sequence:
>912_bases TTGAAGATTGATATAAGAAAAACGATTGTAACTTCTACTATTATGCTATTAGCAGCAATTACCATTCATTTTGTACCAGG GCTATTCTTAATTATTATACCTTTTTTGCTTATTCCTGCAGTGACTTTATATTATCACTCCAGAGAAAGTTACTACATGA TGAGTTTTGTGGTTCTTATCGCTGTTATATTTACTTCGATATTTACAATGCAAATTATGTTAAGTGTTATTTTTGGAGGC TATATTGTAGGTCAATTATTAAAAGAGAAAGCATCTAAGGAACGTATACTATACATTTTGACCGTATTTTATACCATTTT TTCGCTAATCGCTATAATTATATTGCAAATGGCTGGTGTTATGCCGAAGATGACGGATATTTTTGCCCCTGCTACAGATA CTTACTATAACTTATTGATGGCAGAGGTAGAAAAAGGTACAGTTACTAAAACATATGCTGATCTATTTTTAACGAGTATG GATGCATTAGTGTTACAAATACCAGGGTTATTAATTTTGTTTTTATTCATATTATCCCTTATTCAAATCAGCATTACTTT TCCGTTTGTAAGAAAGTTTAAAGTATCGACACCAAATTTCCGACCATTATATATGTGGCGTATTCCAAAAGTAGTGCTAT ATTTATACTTTCTTACGCTTTTTACTGCACTCTTCATTACAGATACTGATGTCGTGCTGTTAGGCATAGTCACAAACTTT AAGTATGTGTTAGAATGGATTATATTCATCCAGGGACTCTCGCTGTTTAGCTTTTTTATAAAAGTAAGACGTACACATCC AGTATTAAACATTTTAATATACATATTTGCATTTATTTTCTCACCAGTGACACAAATCTTTGGAATGATAGATATGATAT TGAATTTAAAATCTAATATTAAGCGCAAGTAA
Upstream 100 bases:
>100_bases TCAGCTTTTTATTTTGTTCTGAAAAATTGAGACTTGAGAAAGAAAGTTGTAAAATAGAGTAGTTATCGAAATTTTTGTTT TAAGAAAGTGAGATTTTAAT
Downstream 100 bases:
>100_bases GATTATAAATTTAACGAAGAGGTGTCAAAATGAACAGAAAGTATAATAGGCAGACATTGATCATACCCTTTATTGTTATG ACGCTTGCTGCTATCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKIDIRKTIVTSTIMLLAAITIHFVPGLFLIIIPFLLIPAVTLYYHSRESYYMMSFVVLIAVIFTSIFTMQIMLSVIFGG YIVGQLLKEKASKERILYILTVFYTIFSLIAIIILQMAGVMPKMTDIFAPATDTYYNLLMAEVEKGTVTKTYADLFLTSM DALVLQIPGLLILFLFILSLIQISITFPFVRKFKVSTPNFRPLYMWRIPKVVLYLYFLTLFTALFITDTDVVLLGIVTNF KYVLEWIIFIQGLSLFSFFIKVRRTHPVLNILIYIFAFIFSPVTQIFGMIDMILNLKSNIKRK
Sequences:
>Translated_303_residues MKIDIRKTIVTSTIMLLAAITIHFVPGLFLIIIPFLLIPAVTLYYHSRESYYMMSFVVLIAVIFTSIFTMQIMLSVIFGG YIVGQLLKEKASKERILYILTVFYTIFSLIAIIILQMAGVMPKMTDIFAPATDTYYNLLMAEVEKGTVTKTYADLFLTSM DALVLQIPGLLILFLFILSLIQISITFPFVRKFKVSTPNFRPLYMWRIPKVVLYLYFLTLFTALFITDTDVVLLGIVTNF KYVLEWIIFIQGLSLFSFFIKVRRTHPVLNILIYIFAFIFSPVTQIFGMIDMILNLKSNIKRK >Mature_303_residues MKIDIRKTIVTSTIMLLAAITIHFVPGLFLIIIPFLLIPAVTLYYHSRESYYMMSFVVLIAVIFTSIFTMQIMLSVIFGG YIVGQLLKEKASKERILYILTVFYTIFSLIAIIILQMAGVMPKMTDIFAPATDTYYNLLMAEVEKGTVTKTYADLFLTSM DALVLQIPGLLILFLFILSLIQISITFPFVRKFKVSTPNFRPLYMWRIPKVVLYLYFLTLFTALFITDTDVVLLGIVTNF KYVLEWIIFIQGLSLFSFFIKVRRTHPVLNILIYIFAFIFSPVTQIFGMIDMILNLKSNIKRK
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34964; Mature: 34964
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDIRKTIVTSTIMLLAAITIHFVPGLFLIIIPFLLIPAVTLYYHSRESYYMMSFVVLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVIFTSIFTMQIMLSVIFGGYIVGQLLKEKASKERILYILTVFYTIFSLIAIIILQMAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MPKMTDIFAPATDTYYNLLMAEVEKGTVTKTYADLFLTSMDALVLQIPGLLILFLFILSL CHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQISITFPFVRKFKVSTPNFRPLYMWRIPKVVLYLYFLTLFTALFITDTDVVLLGIVTNF HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KYVLEWIIFIQGLSLFSFFIKVRRTHPVLNILIYIFAFIFSPVTQIFGMIDMILNLKSNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KRK CCC >Mature Secondary Structure MKIDIRKTIVTSTIMLLAAITIHFVPGLFLIIIPFLLIPAVTLYYHSRESYYMMSFVVLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVIFTSIFTMQIMLSVIFGGYIVGQLLKEKASKERILYILTVFYTIFSLIAIIILQMAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MPKMTDIFAPATDTYYNLLMAEVEKGTVTKTYADLFLTSMDALVLQIPGLLILFLFILSL CHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQISITFPFVRKFKVSTPNFRPLYMWRIPKVVLYLYFLTLFTALFITDTDVVLLGIVTNF HHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KYVLEWIIFIQGLSLFSFFIKVRRTHPVLNILIYIFAFIFSPVTQIFGMIDMILNLKSNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KRK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA