| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111126
Identifier: 222111126
GI number: 222111126
Start: 2069263
End: 2069739
Strand: Direct
Name: 222111126
Synonym: Dtpsy_1934
Alternate gene names: NA
Gene position: 2069263-2069739 (Clockwise)
Preceding gene: 222111125
Following gene: 222111128
Centisome position: 54.5
GC content: 71.49
Gene sequence:
>477_bases GTGCCCTTCGCACTGCCCCTGCCGCATCGCATCCTATCCAAAGCCCTGGCCGCCGCCGCGCTGGCCCTGCCCCTGCTCAT GCCCGCCGGCGTGCAGGCGCGCGAGTTCGTCAGCATCAAGGGCAATGCGGTCAACGTGCGCGAGAAACCCAGCACCCGCT CGGCGACGCTGTGGGAGCTGGGCCGGGGCTATCCGCTGCAGGTGCAGCAGCGCAAGGGCCGTTGGCTCCAAGTGCGGGAT TTCGAGGAGCCGCTCGGCTGGGTGTACGCGCCGCTGACCAGCAAGACGCCGCACCGCGTGGTGACGGCACGCGTCGCCAA CCTGCGCGCCGGCCCCGGCCAGCAGCACAAGACCGTGGGCAAGCTGCAGCAGCATGAGGTGGTGCGCAGCCTGGGCCAGT CGGGTAGCTGGGCCCGGGTGCAGCGCGAAGACGGGCAAAAGGGCTGGGTGGCCCGGCGCCTGACCTGGGGCTGGTGA
Upstream 100 bases:
>100_bases GGCCATCGGTTCGCGCCTGAAACGGCCGGAACTTCGCACGCGGGCGGCCCTCCACCTGGGGGTTGTCATCCCTCAGTTCC AACTCCAAGGAGATCACCCC
Downstream 100 bases:
>100_bases TATTTCGGGTGCCGCGGCGGTGTGGGCCTGTGGCGCGCGCGGTGCCCGGCGCTCCCTCAGCCGCCCGTTACTCGATCACA CGCTGCGCCACCGGCGCATA
Product: sh3 type 3 domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPFALPLPHRILSKALAAAALALPLLMPAGVQAREFVSIKGNAVNVREKPSTRSATLWELGRGYPLQVQQRKGRWLQVRD FEEPLGWVYAPLTSKTPHRVVTARVANLRAGPGQQHKTVGKLQQHEVVRSLGQSGSWARVQREDGQKGWVARRLTWGW
Sequences:
>Translated_158_residues MPFALPLPHRILSKALAAAALALPLLMPAGVQAREFVSIKGNAVNVREKPSTRSATLWELGRGYPLQVQQRKGRWLQVRD FEEPLGWVYAPLTSKTPHRVVTARVANLRAGPGQQHKTVGKLQQHEVVRSLGQSGSWARVQREDGQKGWVARRLTWGW >Mature_157_residues PFALPLPHRILSKALAAAALALPLLMPAGVQAREFVSIKGNAVNVREKPSTRSATLWELGRGYPLQVQQRKGRWLQVRDF EEPLGWVYAPLTSKTPHRVVTARVANLRAGPGQQHKTVGKLQQHEVVRSLGQSGSWARVQREDGQKGWVARRLTWGW
Specific function: Unknown
COG id: COG3807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17669; Mature: 17538
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFALPLPHRILSKALAAAALALPLLMPAGVQAREFVSIKGNAVNVREKPSTRSATLWEL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHH GRGYPLQVQQRKGRWLQVRDFEEPLGWVYAPLTSKTPHRVVTARVANLRAGPGQQHKTVG CCCCCEEECCCCCCEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH KLQQHEVVRSLGQSGSWARVQREDGQKGWVARRLTWGW HHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCC >Mature Secondary Structure PFALPLPHRILSKALAAAALALPLLMPAGVQAREFVSIKGNAVNVREKPSTRSATLWEL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHH GRGYPLQVQQRKGRWLQVRDFEEPLGWVYAPLTSKTPHRVVTARVANLRAGPGQQHKTVG CCCCCEEECCCCCCEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHH KLQQHEVVRSLGQSGSWARVQREDGQKGWVARRLTWGW HHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA