Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222111054

Identifier: 222111054

GI number: 222111054

Start: 1982998

End: 1983717

Strand: Direct

Name: 222111054

Synonym: Dtpsy_1861

Alternate gene names: NA

Gene position: 1982998-1983717 (Clockwise)

Preceding gene: 222111048

Following gene: 222111055

Centisome position: 52.23

GC content: 58.33

Gene sequence:

>720_bases
ATGAAGAAGACGAACAAGTTCTCGCCCGAGGTGCGTGAGCGCGCAGTGAGAATGGTGCAGGAGCAGCGCGGGGATTACCC
ATCGCTGTGGGCCGCCATTGAATCCATCGCCCCCAAGATTGGCTGTGTACCGCAGACCCTGAACGAGTGGGTCATCCGCG
CTGTAACCGATGACGTGCAAGAGGACGGCGAGTCACCTGGTGGGCTGGCTTACCGCGTAGAGGCGGGCGTCTTCAAGCGC
ATTTGCGACGATGCAAAGCGCGATAAGGTATCTGAGGCACAGGTCGGCATTCGCCCCGATGCAACGGTGTGGAAGATGTC
CATCGAAGAAGCGGCAAGCGACGGGGTCACGCGAAATTACTGCTTTAACCACGGCGAAGCGCGCATTGGGTGGGAGAACG
CCGGTGACTTGCTGACGCAGAATTTTGAGAAGATGGCTGAACTGGGCGGCAAGGAAAAAAGCTCGCTGCGCCACTTTGGA
TTCAACGTGCAGCCAGGGGATGTGGTGGTTTGCCTCAAGACGGTCAAGACCATTCAGGCTGTCGGCGTAGTCACGGGCTC
GTACCAATATGAGTCAGACGTACCCCCAGGGGTTAGGACAGACTATGTGCACAAGCTGCCCATCCACTGGCTTGCCACTG
GCATCGACCTGGATATCACTGCGCTCAATGGTGGCAAGCAGTTGTGCAAGTGCCTCGGCACCGCCAAAGCTGGGCTGTGA

Upstream 100 bases:

>100_bases
ATTTCCAGCCGCGTGCCGACCCGAAGGGAAAATGGCGTCAGTCTCGACACTGAATCGCCCCGGTTTTTGAGGAGGCTCAA
CACTCTGAGAGGATTGAGCC

Downstream 100 bases:

>100_bases
ATGCAGAAGCGTTTGACCGCTTGGACAGCTACGCGGCAATTTTGAATGCGGTAGGCGCCCCTGCGGTGTCACATGCAAAC
GTTCTGCTCAAAGAGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQEDGESPGGLAYRVEAGVFKR
ICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNYCFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFG
FNVQPGDVVVCLKTVKTIQAVGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL

Sequences:

>Translated_239_residues
MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQEDGESPGGLAYRVEAGVFKR
ICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNYCFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFG
FNVQPGDVVVCLKTVKTIQAVGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL
>Mature_239_residues
MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQEDGESPGGLAYRVEAGVFKR
ICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNYCFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFG
FNVQPGDVVVCLKTVKTIQAVGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 26240; Mature: 26240

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQ
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EDGESPGGLAYRVEAGVFKRICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNY
HCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHH
CFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFGFNVQPGDVVVCLKTVKTIQA
HHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHH
VGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL
HHHEECCEEECCCCCCCCCCCHHHHCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQ
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EDGESPGGLAYRVEAGVFKRICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNY
HCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHH
CFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFGFNVQPGDVVVCLKTVKTIQA
HHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHH
VGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL
HHHEECCEEECCCCCCCCCCCHHHHCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]