| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111054
Identifier: 222111054
GI number: 222111054
Start: 1982998
End: 1983717
Strand: Direct
Name: 222111054
Synonym: Dtpsy_1861
Alternate gene names: NA
Gene position: 1982998-1983717 (Clockwise)
Preceding gene: 222111048
Following gene: 222111055
Centisome position: 52.23
GC content: 58.33
Gene sequence:
>720_bases ATGAAGAAGACGAACAAGTTCTCGCCCGAGGTGCGTGAGCGCGCAGTGAGAATGGTGCAGGAGCAGCGCGGGGATTACCC ATCGCTGTGGGCCGCCATTGAATCCATCGCCCCCAAGATTGGCTGTGTACCGCAGACCCTGAACGAGTGGGTCATCCGCG CTGTAACCGATGACGTGCAAGAGGACGGCGAGTCACCTGGTGGGCTGGCTTACCGCGTAGAGGCGGGCGTCTTCAAGCGC ATTTGCGACGATGCAAAGCGCGATAAGGTATCTGAGGCACAGGTCGGCATTCGCCCCGATGCAACGGTGTGGAAGATGTC CATCGAAGAAGCGGCAAGCGACGGGGTCACGCGAAATTACTGCTTTAACCACGGCGAAGCGCGCATTGGGTGGGAGAACG CCGGTGACTTGCTGACGCAGAATTTTGAGAAGATGGCTGAACTGGGCGGCAAGGAAAAAAGCTCGCTGCGCCACTTTGGA TTCAACGTGCAGCCAGGGGATGTGGTGGTTTGCCTCAAGACGGTCAAGACCATTCAGGCTGTCGGCGTAGTCACGGGCTC GTACCAATATGAGTCAGACGTACCCCCAGGGGTTAGGACAGACTATGTGCACAAGCTGCCCATCCACTGGCTTGCCACTG GCATCGACCTGGATATCACTGCGCTCAATGGTGGCAAGCAGTTGTGCAAGTGCCTCGGCACCGCCAAAGCTGGGCTGTGA
Upstream 100 bases:
>100_bases ATTTCCAGCCGCGTGCCGACCCGAAGGGAAAATGGCGTCAGTCTCGACACTGAATCGCCCCGGTTTTTGAGGAGGCTCAA CACTCTGAGAGGATTGAGCC
Downstream 100 bases:
>100_bases ATGCAGAAGCGTTTGACCGCTTGGACAGCTACGCGGCAATTTTGAATGCGGTAGGCGCCCCTGCGGTGTCACATGCAAAC GTTCTGCTCAAAGAGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQEDGESPGGLAYRVEAGVFKR ICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNYCFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFG FNVQPGDVVVCLKTVKTIQAVGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL
Sequences:
>Translated_239_residues MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQEDGESPGGLAYRVEAGVFKR ICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNYCFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFG FNVQPGDVVVCLKTVKTIQAVGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL >Mature_239_residues MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQEDGESPGGLAYRVEAGVFKR ICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNYCFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFG FNVQPGDVVVCLKTVKTIQAVGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 26240; Mature: 26240
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQ CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EDGESPGGLAYRVEAGVFKRICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNY HCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHH CFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFGFNVQPGDVVVCLKTVKTIQA HHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHH VGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL HHHEECCEEECCCCCCCCCCCHHHHCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MKKTNKFSPEVRERAVRMVQEQRGDYPSLWAAIESIAPKIGCVPQTLNEWVIRAVTDDVQ CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EDGESPGGLAYRVEAGVFKRICDDAKRDKVSEAQVGIRPDATVWKMSIEEAASDGVTRNY HCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHH CFNHGEARIGWENAGDLLTQNFEKMAELGGKEKSSLRHFGFNVQPGDVVVCLKTVKTIQA HHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHH VGVVTGSYQYESDVPPGVRTDYVHKLPIHWLATGIDLDITALNGGKQLCKCLGTAKAGL HHHEECCEEECCCCCCCCCCCHHHHCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]