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The map label for this gene is ynfA [C]

Identifier: 222110862

GI number: 222110862

Start: 1765903

End: 1766235

Strand: Direct

Name: ynfA [C]

Synonym: Dtpsy_1668

Alternate gene names: 222110862

Gene position: 1765903-1766235 (Clockwise)

Preceding gene: 222110861

Following gene: 222110863

Centisome position: 46.51

GC content: 69.67

Gene sequence:

>333_bases
ATGCTGCCTTTCAAGACCCTGGCCCTGTTCCTCCTCACTGCCGTGGCGGAAATCGTCGGTTGCTATCTGCCCTGGTTGTG
GTTGCGCCAGGGGCGCAGCGCCTGGCTGCTGGTGCCGGCGGCCGCCAGCCTGGCGCTGTTTGCCTGGCTGCTCACGCTGC
ATCCGGCGGCCACAGGGCGTGTGTACGCGGCCTACGGCGGCGTGTATGTGGCCGTGGCGCTGGTCTGGCTGTGGACGGTT
GACGGCGTGCGCCCCGGCCCATGGGACTGGCTGGGCGTGTCCGTCACGCTGTGCGGCATGGCCATCATTGCCTTCGCCCC
GCGTGGGGGCTGA

Upstream 100 bases:

>100_bases
TGCTCAGCCCACCGCTGCAGGCCGCGGCGTTCGAGGCCTTGGTGCTGAAGCGGGCCGGCGTCTGAACGCTGCGGCCTTCT
TTTTCATCACGCATTCACGC

Downstream 100 bases:

>100_bases
GCTGCCGTAGGATGCTCTCGTAAGAATAGCTGCTGGCGCTTGCTGGGTAAGCGCTAGAGGCCATTTTTGCTTGCAATCGA
AGGATGCCCGGCTGGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLPFKTLALFLLTAVAEIVGCYLPWLWLRQGRSAWLLVPAAASLALFAWLLTLHPAATGRVYAAYGGVYVAVALVWLWTV
DGVRPGPWDWLGVSVTLCGMAIIAFAPRGG

Sequences:

>Translated_110_residues
MLPFKTLALFLLTAVAEIVGCYLPWLWLRQGRSAWLLVPAAASLALFAWLLTLHPAATGRVYAAYGGVYVAVALVWLWTV
DGVRPGPWDWLGVSVTLCGMAIIAFAPRGG
>Mature_110_residues
MLPFKTLALFLLTAVAEIVGCYLPWLWLRQGRSAWLLVPAAASLALFAWLLTLHPAATGRVYAAYGGVYVAVALVWLWTV
DGVRPGPWDWLGVSVTLCGMAIIAFAPRGG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=99, Percent_Identity=65.6565656565657, Blast_Score=129, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1668_ACIET (B9MIW0)

Other databases:

- EMBL:   CP001392
- RefSeq:   YP_002553126.1
- GeneID:   7384742
- GenomeReviews:   CP001392_GR
- KEGG:   dia:Dtpsy_1668
- ProtClustDB:   CLSK732513
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11885; Mature: 11885

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x239219f8)-; HASH(0x23e0da1c)-; HASH(0x24528b34)-; HASH(0x24893b24)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPFKTLALFLLTAVAEIVGCYLPWLWLRQGRSAWLLVPAAASLALFAWLLTLHPAATGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCE
VYAAYGGVYVAVALVWLWTVDGVRPGPWDWLGVSVTLCGMAIIAFAPRGG
EEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MLPFKTLALFLLTAVAEIVGCYLPWLWLRQGRSAWLLVPAAASLALFAWLLTLHPAATGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCE
VYAAYGGVYVAVALVWLWTVDGVRPGPWDWLGVSVTLCGMAIIAFAPRGG
EEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA