| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yqjD [C]
Identifier: 222110841
GI number: 222110841
Start: 1738579
End: 1738887
Strand: Direct
Name: yqjD [C]
Synonym: Dtpsy_1647
Alternate gene names: 222110841
Gene position: 1738579-1738887 (Clockwise)
Preceding gene: 222110840
Following gene: 222110842
Centisome position: 45.79
GC content: 66.02
Gene sequence:
>309_bases ATGACCACCGTATCCGAAACCATTTCCTCCACCCAGGCAGAACTCGAAAAGCTGGTGGGCGACCTGCGCGGTCTGCTGGC CAGCAAGGATCTGGACGGTATTCCCGAGATCAAGCAACTGCGTCAGCGCCTGGATGACGGCATTCATTCGGTGCGTGATT CCGCCGTGCGTGCCGCTCAGGAGGCAGCCCTGCAGGCCAAAGATGCCGCGCGCGCCGCCGACCGTTATGCCCACGACGAG CCCTGGCGCGTTGCCGGCGCTGCGCTGGCCGTAGGGGCGCTGGTGGGCTTCATGCTGGCCCGCCGCTGA
Upstream 100 bases:
>100_bases TGCCCTGCGGCGCGAGCACTGGGCTAAGATGAGATACCCGCCTACATGGTTTGCCATGTACGGCGTATTACCGTTGTTTC CTGCTATGAAAGGCTCGCGT
Downstream 100 bases:
>100_bases CCGGTAGCGCAGTGGCAGGGCGAATCGTCAACGCTGCGGCGCGCTCCAGCGCCAGGGAGGGGCTTGCATGAACTGGTTGT CGCTGCTCGGCCTGGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTTVSETISSTQAELEKLVGDLRGLLASKDLDGIPEIKQLRQRLDDGIHSVRDSAVRAAQEAALQAKDAARAADRYAHDE PWRVAGAALAVGALVGFMLARR
Sequences:
>Translated_102_residues MTTVSETISSTQAELEKLVGDLRGLLASKDLDGIPEIKQLRQRLDDGIHSVRDSAVRAAQEAALQAKDAARAADRYAHDE PWRVAGAALAVGALVGFMLARR >Mature_101_residues TTVSETISSTQAELEKLVGDLRGLLASKDLDGIPEIKQLRQRLDDGIHSVRDSAVRAAQEAALQAKDAARAADRYAHDEP WRVAGAALAVGALVGFMLARR
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10953; Mature: 10821
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVSETISSTQAELEKLVGDLRGLLASKDLDGIPEIKQLRQRLDDGIHSVRDSAVRAAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAALQAKDAARAADRYAHDEPWRVAGAALAVGALVGFMLARR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTVSETISSTQAELEKLVGDLRGLLASKDLDGIPEIKQLRQRLDDGIHSVRDSAVRAAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAALQAKDAARAADRYAHDEPWRVAGAALAVGALVGFMLARR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA