| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110711
Identifier: 222110711
GI number: 222110711
Start: 1596255
End: 1597361
Strand: Direct
Name: 222110711
Synonym: Dtpsy_1514
Alternate gene names: NA
Gene position: 1596255-1597361 (Clockwise)
Preceding gene: 222110710
Following gene: 222110712
Centisome position: 42.04
GC content: 71.09
Gene sequence:
>1107_bases ATGTCCGCACTGCCCGCCTTTGCGCCACCGGATGACGCGCTGTTCCAGCGCGCCCAGTCCCTGCTGGACGATGAATGGCT GGCCCACGATGCCGATCTGGCTCCCGTGCTGCCCATGGTGCTGGCGCGCGGTGTGGGGCAGGACTGGCACAAGGCCGGAA CCTTCCGCCATCACCTGGTGGGCGTGGCCCGGTCGCTGGCGCTGTGGGGCCAGCCCCGGGACGTGCGTCTGCTCGGGCTG CTGCACAGCGTGTACGGCAATGCCTTCGTCGACCTGGTGAAGTTCGACGCAGCCAGCGAGCGCGGCCGCCTGCAGGCGCT GGTGGGCGAGAGCGCAGAGCACCTGGTGTACCTGTTCTGCACCATGAGCCGCGCGCAGTTCGTGCAAAAGGTGCTGGCCG GCGAGCTGCAGGCCGACGGCTCACTGGTCGTGGAGAAGAACGGCCCCGCGCCGCGCCAGACCGTGCACCTCGCACCCTAC GAGGTGGCGGCTTTCACCATCGTCAGCATGGCCGACACCATTGAGCAGTGGTTCAGCTGGCAGGACGACATCTACTCGCG CTTTCCCGCCGTCGATCCTTCGCGCCCGCAGGCCGTGCACTGGGCCGCGTCGCTGTGGCCCGGACCCATGCGCCCCACGG CCCGCATGGTCAGCCAGATCGCGGCGCTGGGCCTGGCGTTGCAGCACCCCGGGCTGCGCGGGCAGTTGCCGCTGCCGCCC GTGTTCGACCACTGCAGCCAGGGCCTGACGGCGCAGGACGAGGCGGCCGCCACGGCCCTGTATTGGTCGGTGATCCAGTT GGCGCAGCCGCTGGTGGACCTGGACGGCGCCACGGCCACGCTGGAGCAGGCCGTGCGCCTGAACCCCTGGGTGGGCGAGC CGCAGATGGTGCTGGCACAGCTGTACCTGTCGGCCGGCCGCGCGCACGACGCGGCGTGCGCCGCACGCGGGGCGCTGCAG GCCTTCAGCGCCTGGGGCAACGCCTGGGACAAGCGCGTGCAGTGGGACGCCTGGATCGCCTGGACGCGCATCCTGCTGCA GTCGGCCGAGGAGGGCGGCTGGCCCGCGCGGTTGGACAAGCTCAACAACGTGGCGCTCAAGGGCTGA
Upstream 100 bases:
>100_bases TGCAGCGGGCGCTGCGGGCTGTTTTGACAGAAGAACTGCGTGTGCGGGCGGCTTGGCCGATACTCGATGGCAAAGCCACT ACCACGAAGGAGACCCCGCC
Downstream 100 bases:
>100_bases CGGGGCGCCGCCGCGGCCTTCCCGGGGCGGTGGAGAATGCGCGGCCTTTCACCTTCGCACGTGCTCTGCTGTCCGGGTGC TCTTCATGTGTGCGGGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSALPAFAPPDDALFQRAQSLLDDEWLAHDADLAPVLPMVLARGVGQDWHKAGTFRHHLVGVARSLALWGQPRDVRLLGL LHSVYGNAFVDLVKFDAASERGRLQALVGESAEHLVYLFCTMSRAQFVQKVLAGELQADGSLVVEKNGPAPRQTVHLAPY EVAAFTIVSMADTIEQWFSWQDDIYSRFPAVDPSRPQAVHWAASLWPGPMRPTARMVSQIAALGLALQHPGLRGQLPLPP VFDHCSQGLTAQDEAAATALYWSVIQLAQPLVDLDGATATLEQAVRLNPWVGEPQMVLAQLYLSAGRAHDAACAARGALQ AFSAWGNAWDKRVQWDAWIAWTRILLQSAEEGGWPARLDKLNNVALKG
Sequences:
>Translated_368_residues MSALPAFAPPDDALFQRAQSLLDDEWLAHDADLAPVLPMVLARGVGQDWHKAGTFRHHLVGVARSLALWGQPRDVRLLGL LHSVYGNAFVDLVKFDAASERGRLQALVGESAEHLVYLFCTMSRAQFVQKVLAGELQADGSLVVEKNGPAPRQTVHLAPY EVAAFTIVSMADTIEQWFSWQDDIYSRFPAVDPSRPQAVHWAASLWPGPMRPTARMVSQIAALGLALQHPGLRGQLPLPP VFDHCSQGLTAQDEAAATALYWSVIQLAQPLVDLDGATATLEQAVRLNPWVGEPQMVLAQLYLSAGRAHDAACAARGALQ AFSAWGNAWDKRVQWDAWIAWTRILLQSAEEGGWPARLDKLNNVALKG >Mature_367_residues SALPAFAPPDDALFQRAQSLLDDEWLAHDADLAPVLPMVLARGVGQDWHKAGTFRHHLVGVARSLALWGQPRDVRLLGLL HSVYGNAFVDLVKFDAASERGRLQALVGESAEHLVYLFCTMSRAQFVQKVLAGELQADGSLVVEKNGPAPRQTVHLAPYE VAAFTIVSMADTIEQWFSWQDDIYSRFPAVDPSRPQAVHWAASLWPGPMRPTARMVSQIAALGLALQHPGLRGQLPLPPV FDHCSQGLTAQDEAAATALYWSVIQLAQPLVDLDGATATLEQAVRLNPWVGEPQMVLAQLYLSAGRAHDAACAARGALQA FSAWGNAWDKRVQWDAWIAWTRILLQSAEEGGWPARLDKLNNVALKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40218; Mature: 40087
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALPAFAPPDDALFQRAQSLLDDEWLAHDADLAPVLPMVLARGVGQDWHKAGTFRHHLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVARSLALWGQPRDVRLLGLLHSVYGNAFVDLVKFDAASERGRLQALVGESAEHLVYLFC HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH TMSRAQFVQKVLAGELQADGSLVVEKNGPAPRQTVHLAPYEVAAFTIVSMADTIEQWFSW HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCH QDDIYSRFPAVDPSRPQAVHWAASLWPGPMRPTARMVSQIAALGLALQHPGLRGQLPLPP HHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VFDHCSQGLTAQDEAAATALYWSVIQLAQPLVDLDGATATLEQAVRLNPWVGEPQMVLAQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH LYLSAGRAHDAACAARGALQAFSAWGNAWDKRVQWDAWIAWTRILLQSAEEGGWPARLDK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH LNNVALKG HCCCCCCC >Mature Secondary Structure SALPAFAPPDDALFQRAQSLLDDEWLAHDADLAPVLPMVLARGVGQDWHKAGTFRHHLV CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVARSLALWGQPRDVRLLGLLHSVYGNAFVDLVKFDAASERGRLQALVGESAEHLVYLFC HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH TMSRAQFVQKVLAGELQADGSLVVEKNGPAPRQTVHLAPYEVAAFTIVSMADTIEQWFSW HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCH QDDIYSRFPAVDPSRPQAVHWAASLWPGPMRPTARMVSQIAALGLALQHPGLRGQLPLPP HHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VFDHCSQGLTAQDEAAATALYWSVIQLAQPLVDLDGATATLEQAVRLNPWVGEPQMVLAQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH LYLSAGRAHDAACAARGALQAFSAWGNAWDKRVQWDAWIAWTRILLQSAEEGGWPARLDK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH LNNVALKG HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA