Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222110699

Identifier: 222110699

GI number: 222110699

Start: 1579297

End: 1581867

Strand: Direct

Name: 222110699

Synonym: Dtpsy_1502

Alternate gene names: NA

Gene position: 1579297-1581867 (Clockwise)

Preceding gene: 222110689

Following gene: 222110700

Centisome position: 41.6

GC content: 73.2

Gene sequence:

>2571_bases
ATGACACCCATAGCAAAAGACGATCACGCCGCAGCGTGCAGCGCGGGGTGGCGCGCGGTTTTCGAGCAGGTGCGCTCAGC
GGCCGCGCAGCGCGGCGCGCACCTGGCGGCCACCGTGGTGCTGGTGCCGTACGCCCAGCTCATGGGCGAGGCGCGCCGGC
AATGGCAGCGCGCCTACCCTCAGGGTTTCGCGCCGCGCTTCGAGACCACGCGCAACTGGGCTGCCCAGCTGGGCGCGCCT
CTGGCGGAGGGCAGCGAGTACGCGGGCGATATGGCGCGCGATGCGGTCACCGCACGTGCATTGCTCGACCACGCCGGTCT
TGCCGCGCACCGCGAAGTCCTCAGCGGTCCGCTGCTGGAGATGGCTGCGCAGTTGGCGGTGGTGGCAGCGGCCGTGGCTC
CTGGCCGGCGCCCGGACTGGGGCGAGGCGGCGCGCGCCCTGCTGCCGGCGGCGGGCGACGGTGGCGCGCTCCGGCTGGAG
GCCGCCGCAGCGCGCATCGCCCTGGAATGGGTGCTGGCCTCGCGCCACGTGGGGGATGTGCTGTTCGAGTCTGGCGTGCG
TGCGGCCGTGCCGCTGCTTGTGGTGGTGCAGGGCTTCCAACCCGACCCCCTGGCCCGCACGCTGGCGCAGCACTGGGCAG
AGGCGGGCCTTGTCGTGGACCTGCCGCAGGTGATGGACGGCGGGAAGGCCGGCGTGCCAACCTTGCATGCCGTGCCCGAT
GCCGAGGACGAGGCCCAGCGCGCCGCCGCCTGTGTGCTGCAGCACCTGGCGCAGGGACAGGCGCCCGTGGCACTGGTGGC
CAACGACCGCGCGCTCACCCGCCGCATCAGTGCCTTGCTCGCCGGCGCGGGCGTGGCAGTGCACGACGAAAACGGCTGGC
TGCTCTCCACCACCCACGCCGCGGCGCGGCTGATGGCGGTGCTGCAGGCCGGTGCCTGGGACGCCACCGCCGATGCCGTG
CTCGACTGGCTCAAGCAGTCGCCCGCGGTGGATGGGGCCGCACTGCGCGCGCTGGAGCACTGGCTGCGCCGTGCGGGCGC
CCGGCATTGGAGCGGCGCGGTGACGCAACTGCAGGCGTTGGCTGAGCGGCGCCCGGCCGAGGCCGCGTTGGCGGACCAGG
TACAGGCCTGGCGCGCGCAGCTGCGGGCCGCGCGGCCGCTGGCCCAGTGGTTGCAGTCGCTGCGCGTGCTGCTGCAGGAC
TGCGGCCTGTGGGACGGGCTGCAGCAGGACGAGGCCGGTGCGCGCGTGCTGGCCGAGCTGCGCCTGCCCGAGGGCCTGCA
GGACGATCTGCAGGACATGGACGGGGCCGGTGCGCGCATGGCGCTGGCGGACTTCACACGCTGGGTGGGAGAGGTGCTGG
AATGCGCGCGCTATCGACCGGCCTATGTGGACGATGCACCCGTGGTGGTTCTGCCCCTGCCGCAGCTGCTGGCGCGCCCG
TTCGCTGCGCTGGTGCTGCCCGGCTGCGATGAGAAACGCCTGCAGGCCGCGCCTGAACCGCCCGGCCCCTGGACGCAGGC
GCAGCGCGAGGGACTGGGGCTGCCCACGCGCGACCTGTTGGCCGCCGCGCAGCGCGCCGCCTGGCGGCAGGCCCTGCGTA
TTGCGCGTGTCGACCTCCTGTGGCGCGTGGGTGACGAGGGGGGCGAACCCCTCCTGCCGAGTCCGCTGGTCCAGGCGCTT
CGGCTGGACGGAACCGGCACGGACGGTGCCGATCCCCGGGTGACGCGCAGCGTGCCCGTGGCACCCACGGCGCGTCCGCT
GCCGGTGGGCGCGCAGCTGCCGGTGCAGCGGCTGTCGTCCTCGGCATATTCCGACCTGCGCCACTGTCCCTACCGCTTCT
TCGCGCTGCGCCAACTGCAGCTGCAGGAAGACGACGAACTGGACGCCGGGCTGGACAAACGTGACTTCGGCACCTGGCTG
CATGCCGTGCTGCAGCACTTCCATGAGGCGTTGCAGGACGCGCCCACGGGCGACGCCGCGGCGCGCACGGCGCTCATGGA
CGAGGCGGCTGCGCGCGCCACGCGCGAGCTGGGGCTGCAGGAGGGCGACTTCCTGCCCTACGCCTCGGGATGGCCCGCGC
TGCGCGCCGGCTATCTGGAATGGCTGGGCAAGCACGAAGCCGCTGGCGCCTGTTTTCGCCAGGCCGAGTTGCGCGCGCGC
CAGCCGCTGGGCGCGCTGGAACTGGTCGGCACACTGGACCGTGTGGACGCCGTGCGCCCGCAGGGCGGCGGCGAGCCCCT
CACGCTGGTGATCGACTACAAGACCGAGAGCGACGCCCTCACGCGCGGGCGCATCAAGGCCGGGGCCGAGGACACACAGC
TCGCCTTCTACGCCGCGTTGCTGCAGGACGACACCCTGCGGGCTGCCTACGTGAATGTGGGTGAGCGCGGCGAAACCCGG
CTGCACGAGCAGGACGACGTGGTGCACCTGCGCGACTTGCTGCTGGGCGGCATCACGCACGACATGCAGCGCATTGCAGC
CGGCGCGCCGCTGCCCGCGTTGGGCGAGGGCAGCGTGTGCGAATGGTGCGCCGCGCGCGGTTTGTGCCGCAAGGATTTCT
GGAATGAGTGA

Upstream 100 bases:

>100_bases
TCCTTGTGTGAGCAGTGGGCGATGCCGGTACGTATAAAGTCCAGTCATTGTGACAGAAACCGAATCCCTGCATCCTCATA
TGGCCGGTGCTTGTAACGCT

Downstream 100 bases:

>100_bases
AGCTGCCGCGCAAGCCGCCTACGAACACAACGGCCAACCGGTCACGCGGGAGGCCTTCTACGCCATTGCCTGCGACCCGC
AGCGCAGCGTGGCCGTGGAG

Product: exonuclease-like protein

Products: NA

Alternate protein names: Exonuclease-Like Protein; Exonuclease-Like; Helicase C_term Recb Family Exonuclease; Inactivated Superfamily I Helicase-Like Protein; Helicase C_term RecB Family Exonuclease; Inactivated Superfamily I Helicase

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MTPIAKDDHAAACSAGWRAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYPQGFAPRFETTRNWAAQLGAP
LAEGSEYAGDMARDAVTARALLDHAGLAAHREVLSGPLLEMAAQLAVVAAAVAPGRRPDWGEAARALLPAAGDGGALRLE
AAAARIALEWVLASRHVGDVLFESGVRAAVPLLVVVQGFQPDPLARTLAQHWAEAGLVVDLPQVMDGGKAGVPTLHAVPD
AEDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLAGAGVAVHDENGWLLSTTHAAARLMAVLQAGAWDATADAV
LDWLKQSPAVDGAALRALEHWLRRAGARHWSGAVTQLQALAERRPAEAALADQVQAWRAQLRAARPLAQWLQSLRVLLQD
CGLWDGLQQDEAGARVLAELRLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARP
FAALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLLWRVGDEGGEPLLPSPLVQAL
RLDGTGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSSSAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWL
HAVLQHFHEALQDAPTGDAAARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRAR
QPLGALELVGTLDRVDAVRPQGGGEPLTLVIDYKTESDALTRGRIKAGAEDTQLAFYAALLQDDTLRAAYVNVGERGETR
LHEQDDVVHLRDLLLGGITHDMQRIAAGAPLPALGEGSVCEWCAARGLCRKDFWNE

Sequences:

>Translated_856_residues
MTPIAKDDHAAACSAGWRAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYPQGFAPRFETTRNWAAQLGAP
LAEGSEYAGDMARDAVTARALLDHAGLAAHREVLSGPLLEMAAQLAVVAAAVAPGRRPDWGEAARALLPAAGDGGALRLE
AAAARIALEWVLASRHVGDVLFESGVRAAVPLLVVVQGFQPDPLARTLAQHWAEAGLVVDLPQVMDGGKAGVPTLHAVPD
AEDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLAGAGVAVHDENGWLLSTTHAAARLMAVLQAGAWDATADAV
LDWLKQSPAVDGAALRALEHWLRRAGARHWSGAVTQLQALAERRPAEAALADQVQAWRAQLRAARPLAQWLQSLRVLLQD
CGLWDGLQQDEAGARVLAELRLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARP
FAALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLLWRVGDEGGEPLLPSPLVQAL
RLDGTGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSSSAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWL
HAVLQHFHEALQDAPTGDAAARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRAR
QPLGALELVGTLDRVDAVRPQGGGEPLTLVIDYKTESDALTRGRIKAGAEDTQLAFYAALLQDDTLRAAYVNVGERGETR
LHEQDDVVHLRDLLLGGITHDMQRIAAGAPLPALGEGSVCEWCAARGLCRKDFWNE
>Mature_855_residues
TPIAKDDHAAACSAGWRAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYPQGFAPRFETTRNWAAQLGAPL
AEGSEYAGDMARDAVTARALLDHAGLAAHREVLSGPLLEMAAQLAVVAAAVAPGRRPDWGEAARALLPAAGDGGALRLEA
AAARIALEWVLASRHVGDVLFESGVRAAVPLLVVVQGFQPDPLARTLAQHWAEAGLVVDLPQVMDGGKAGVPTLHAVPDA
EDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLAGAGVAVHDENGWLLSTTHAAARLMAVLQAGAWDATADAVL
DWLKQSPAVDGAALRALEHWLRRAGARHWSGAVTQLQALAERRPAEAALADQVQAWRAQLRAARPLAQWLQSLRVLLQDC
GLWDGLQQDEAGARVLAELRLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARPF
AALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLLWRVGDEGGEPLLPSPLVQALR
LDGTGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSSSAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWLH
AVLQHFHEALQDAPTGDAAARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRARQ
PLGALELVGTLDRVDAVRPQGGGEPLTLVIDYKTESDALTRGRIKAGAEDTQLAFYAALLQDDTLRAAYVNVGERGETRL
HEQDDVVHLRDLLLGGITHDMQRIAAGAPLPALGEGSVCEWCAARGLCRKDFWNE

Specific function: Unknown

COG id: COG2887

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91962; Mature: 91831

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIAKDDHAAACSAGWRAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGFAPRFETTRNWAAQLGAPLAEGSEYAGDMARDAVTARALLDHAGLAAHREVLSGPLLE
CCCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MAAQLAVVAAAVAPGRRPDWGEAARALLPAAGDGGALRLEAAAARIALEWVLASRHVGDV
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LFESGVRAAVPLLVVVQGFQPDPLARTLAQHWAEAGLVVDLPQVMDGGKAGVPTLHAVPD
HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECHHHHCCCCCCCCCEECCCC
AEDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLAGAGVAVHDENGWLLSTTHA
CHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCCEEEHHHH
AARLMAVLQAGAWDATADAVLDWLKQSPAVDGAALRALEHWLRRAGARHWSGAVTQLQAL
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AERRPAEAALADQVQAWRAQLRAARPLAQWLQSLRVLLQDCGLWDGLQQDEAGARVLAEL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARP
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHCH
FAALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLL
HHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WRVGDEGGEPLLPSPLVQALRLDGTGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSS
HEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWLHAVLQHFHEALQDAPTGDAA
HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
QPLGALELVGTLDRVDAVRPQGGGEPLTLVIDYKTESDALTRGRIKAGAEDTQLAFYAAL
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCHHCCCCCHHHHHHHHHH
LQDDTLRAAYVNVGERGETRLHEQDDVVHLRDLLLGGITHDMQRIAAGAPLPALGEGSVC
HHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EWCAARGLCRKDFWNE
HHHHHCCCHHHHCCCC
>Mature Secondary Structure 
TPIAKDDHAAACSAGWRAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGFAPRFETTRNWAAQLGAPLAEGSEYAGDMARDAVTARALLDHAGLAAHREVLSGPLLE
CCCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MAAQLAVVAAAVAPGRRPDWGEAARALLPAAGDGGALRLEAAAARIALEWVLASRHVGDV
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LFESGVRAAVPLLVVVQGFQPDPLARTLAQHWAEAGLVVDLPQVMDGGKAGVPTLHAVPD
HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECHHHHCCCCCCCCCEECCCC
AEDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLAGAGVAVHDENGWLLSTTHA
CHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCCEEEHHHH
AARLMAVLQAGAWDATADAVLDWLKQSPAVDGAALRALEHWLRRAGARHWSGAVTQLQAL
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AERRPAEAALADQVQAWRAQLRAARPLAQWLQSLRVLLQDCGLWDGLQQDEAGARVLAEL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARP
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHCH
FAALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLL
HHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WRVGDEGGEPLLPSPLVQALRLDGTGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSS
HEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWLHAVLQHFHEALQDAPTGDAA
HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
QPLGALELVGTLDRVDAVRPQGGGEPLTLVIDYKTESDALTRGRIKAGAEDTQLAFYAAL
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCHHCCCCCHHHHHHHHHH
LQDDTLRAAYVNVGERGETRLHEQDDVVHLRDLLLGGITHDMQRIAAGAPLPALGEGSVC
HHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EWCAARGLCRKDFWNE
HHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA