| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is phoU [H]
Identifier: 222110687
GI number: 222110687
Start: 1564148
End: 1564849
Strand: Direct
Name: phoU [H]
Synonym: Dtpsy_1490
Alternate gene names: 222110687
Gene position: 1564148-1564849 (Clockwise)
Preceding gene: 222110686
Following gene: 222110688
Centisome position: 41.2
GC content: 62.39
Gene sequence:
>702_bases ATGGCAGACAAACATCTTTCTTCACAGTTCGACAGCGAACTGAACAACATTTCCTCCCGCGTCATGGAACTGGGCGGCTT GGTGGAGTCGCAGATTCGCCAAGCCATCTATGCGCTTTCCCACTTCAACCTGGAAGCCGTGGAACAGGTGGAGCAGTTGG AGCGCCGCGTGAACGCCATGGAGGTCGAGATCGACCATGAGCTGGCCTCCGTCATCGCGCGCCGCCAACCCACCGCACGC GACCTGCGCCTGCTGATGGCCTTCTCCAAGGCCATCGCCAATCTGGAGCGCATGGGTGACGAGGCCACGCGCATGGCGCG CATGGTCAAGTCCATCATCGAAAGCGGGGCCGCCCGTTCGCTACCGTCCAGCGACCTGCGTGTGGCGGCCGACCTGGCTT CGGGGCTCCTGCGCAAGGCGCTGGATGCGTTTGCCCGCCTGGACACCAAGGCCGCTGTTGCCATCCTGAAGGAAGACGAT CTCATCGACCGGGAGTTCGACGGTTTCGTGCGCAAGCTCATCACCTACATGGTGGAAGACCCGCGCACCATCTCCGCCAG CCTGGACTTGCTGTTCCTGGCCAAGGCCATCGAGCGCATTGGCGACCATTCCAAGAACGTGGCCGAGCTGATCATCTATC TCGTCAAGGGCAAGGACGTGCGCCACACGGCGCTGGACGAGATCGAGTCGGCCGTGGCCTGA
Upstream 100 bases:
>100_bases TGGTGGAGTTCGGGGACACAGAGCAGATGTTCTTCAAGCCGCAGCGCAAGGAGACAGAGGACTACATCACGGGCCGCTTC GGCTGATGGAGGTACGGGAC
Downstream 100 bases:
>100_bases GAAAGGCGGTGAACCGATGAAGAAGCTTCCCCGGGTACTCATCGTCGAGGACGAGTCCCCCATCGCAGAATTGGTGGCCG TGAACCTGCGCCACAACGGC
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MADKHLSSQFDSELNNISSRVMELGGLVESQIRQAIYALSHFNLEAVEQVEQLERRVNAMEVEIDHELASVIARRQPTAR DLRLLMAFSKAIANLERMGDEATRMARMVKSIIESGAARSLPSSDLRVAADLASGLLRKALDAFARLDTKAAVAILKEDD LIDREFDGFVRKLITYMVEDPRTISASLDLLFLAKAIERIGDHSKNVAELIIYLVKGKDVRHTALDEIESAVA
Sequences:
>Translated_233_residues MADKHLSSQFDSELNNISSRVMELGGLVESQIRQAIYALSHFNLEAVEQVEQLERRVNAMEVEIDHELASVIARRQPTAR DLRLLMAFSKAIANLERMGDEATRMARMVKSIIESGAARSLPSSDLRVAADLASGLLRKALDAFARLDTKAAVAILKEDD LIDREFDGFVRKLITYMVEDPRTISASLDLLFLAKAIERIGDHSKNVAELIIYLVKGKDVRHTALDEIESAVA >Mature_232_residues ADKHLSSQFDSELNNISSRVMELGGLVESQIRQAIYALSHFNLEAVEQVEQLERRVNAMEVEIDHELASVIARRQPTARD LRLLMAFSKAIANLERMGDEATRMARMVKSIIESGAARSLPSSDLRVAADLASGLLRKALDAFARLDTKAAVAILKEDDL IDREFDGFVRKLITYMVEDPRTISASLDLLFLAKAIERIGDHSKNVAELIIYLVKGKDVRHTALDEIESAVA
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=232, Percent_Identity=43.9655172413793, Blast_Score=195, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25918; Mature: 25787
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKHLSSQFDSELNNISSRVMELGGLVESQIRQAIYALSHFNLEAVEQVEQLERRVNAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EVEIDHELASVIARRQPTARDLRLLMAFSKAIANLERMGDEATRMARMVKSIIESGAARS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC LPSSDLRVAADLASGLLRKALDAFARLDTKAAVAILKEDDLIDREFDGFVRKLITYMVED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PRTISASLDLLFLAKAIERIGDHSKNVAELIIYLVKGKDVRHTALDEIESAVA CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ADKHLSSQFDSELNNISSRVMELGGLVESQIRQAIYALSHFNLEAVEQVEQLERRVNAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EVEIDHELASVIARRQPTARDLRLLMAFSKAIANLERMGDEATRMARMVKSIIESGAARS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC LPSSDLRVAADLASGLLRKALDAFARLDTKAAVAILKEDDLIDREFDGFVRKLITYMVED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PRTISASLDLLFLAKAIERIGDHSKNVAELIIYLVKGKDVRHTALDEIESAVA CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10383982 [H]