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The map label for this gene is 222110624

Identifier: 222110624

GI number: 222110624

Start: 1496982

End: 1497587

Strand: Direct

Name: 222110624

Synonym: Dtpsy_1426

Alternate gene names: NA

Gene position: 1496982-1497587 (Clockwise)

Preceding gene: 222110620

Following gene: 222110626

Centisome position: 39.43

GC content: 73.1

Gene sequence:

>606_bases
ATGGACGCTCACCAACTGCCGCTCGCCGGCGTGGAGCCCGATGCGCCACGCCCCAACCACCATCTTTTCTTTGCCGTGCT
GCCCGAGCCCGGGGCGGCGCAGGCTGCGGCCGATCTGGCGCAGACGCTGATTGCGCGGCACGACCTGCAGGCGCAGGTGC
GCGCGCAGCGCCTGCACGCCACGCTGCTGTCGCTGGGGTGGGAGCCTGCGCTGTCGCCCCGGCATCTGCAGTGGGCGCGC
GACGCGGCGCAGCAGGTGCGGGCGAGGGCGTTCTCGTTGCGGTTCGATCGGGTGTTGAGCTTTCGCCGCGCGCCGCAGGC
CAAGCGGCCCTGCGTGCTCTGCGGCCCCGCCGACGGGCAGCAGGGCTTCATCGCGTTGTACGAGGCGCTGCACGCGGCGC
TGTGGTCGCAGGTGCGGGGGCTGGACGGCGTGCCCCCTGCGCCGCACATCACCCCGCACATGACGCTGTGCTACAGCCGC
CAGGCCGTGCCCGAGCAACCCGTGCCGCCGCTGGAATGGACGGTGCGCCGCTTCGTGCTGCTGCACAACCTGCGCGGCTC
GCCCGGCCCTTACGAGGTGCTGGGCGAGTGGCCGCTGGCGGATTGA

Upstream 100 bases:

>100_bases
CCCCGATCGCCACCATTCCGATTAAAAGAATCGGTTATTGCCCGCGCCGGCGGAGTGCCTGTTACCCACAAGGGCAAGGG
GCGGCGCTACAGTGGGGCGC

Downstream 100 bases:

>100_bases
TTGCTATTGTTTATATAGCTGTTGGCGCTTGATGGATAAGCTCTAGAGGCCAATTTTCTCTGGCATCACGCCATGGTCAT
CAGGCTGGCATTGCCGCCTG

Product: 2',5' RNA ligase

Products: NA

Alternate protein names: Phosphoesterase HXTX; 2 5' RNA Ligase; Ligase; Ligase Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDAHQLPLAGVEPDAPRPNHHLFFAVLPEPGAAQAAADLAQTLIARHDLQAQVRAQRLHATLLSLGWEPALSPRHLQWAR
DAAQQVRARAFSLRFDRVLSFRRAPQAKRPCVLCGPADGQQGFIALYEALHAALWSQVRGLDGVPPAPHITPHMTLCYSR
QAVPEQPVPPLEWTVRRFVLLHNLRGSPGPYEVLGEWPLAD

Sequences:

>Translated_201_residues
MDAHQLPLAGVEPDAPRPNHHLFFAVLPEPGAAQAAADLAQTLIARHDLQAQVRAQRLHATLLSLGWEPALSPRHLQWAR
DAAQQVRARAFSLRFDRVLSFRRAPQAKRPCVLCGPADGQQGFIALYEALHAALWSQVRGLDGVPPAPHITPHMTLCYSR
QAVPEQPVPPLEWTVRRFVLLHNLRGSPGPYEVLGEWPLAD
>Mature_201_residues
MDAHQLPLAGVEPDAPRPNHHLFFAVLPEPGAAQAAADLAQTLIARHDLQAQVRAQRLHATLLSLGWEPALSPRHLQWAR
DAAQQVRARAFSLRFDRVLSFRRAPQAKRPCVLCGPADGQQGFIALYEALHAALWSQVRGLDGVPPAPHITPHMTLCYSR
QAVPEQPVPPLEWTVRRFVLLHNLRGSPGPYEVLGEWPLAD

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22266; Mature: 22266

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHQLPLAGVEPDAPRPNHHLFFAVLPEPGAAQAAADLAQTLIARHDLQAQVRAQRLHA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLSLGWEPALSPRHLQWARDAAQQVRARAFSLRFDRVLSFRRAPQAKRPCVLCGPADGQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
QGFIALYEALHAALWSQVRGLDGVPPAPHITPHMTLCYSRQAVPEQPVPPLEWTVRRFVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHH
LHNLRGSPGPYEVLGEWPLAD
HHHCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MDAHQLPLAGVEPDAPRPNHHLFFAVLPEPGAAQAAADLAQTLIARHDLQAQVRAQRLHA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLSLGWEPALSPRHLQWARDAAQQVRARAFSLRFDRVLSFRRAPQAKRPCVLCGPADGQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
QGFIALYEALHAALWSQVRGLDGVPPAPHITPHMTLCYSRQAVPEQPVPPLEWTVRRFVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCHHHHHHHHHH
LHNLRGSPGPYEVLGEWPLAD
HHHCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA