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The map label for this gene is trbI [H]

Identifier: 222110526

GI number: 222110526

Start: 1384940

End: 1386223

Strand: Direct

Name: trbI [H]

Synonym: Dtpsy_1325

Alternate gene names: 222110526

Gene position: 1384940-1386223 (Clockwise)

Preceding gene: 222110525

Following gene: 222110527

Centisome position: 36.48

GC content: 67.06

Gene sequence:

>1284_bases
ATGAGCCAGGACGAAACCCCGGATGTGCCCATTCCCGACGCTGCGCCGAAGGTCGCGCCCGAGAACGTGGCGCTGCGGGC
GCAACCGCGCCCGGTGACGCGCCTCAATCGGCGAACGCTGGCGCTGCTGACTGGCGGCCTCGGCGTGGCCGTGCTGGGCG
CAACGATGTGGTCGTTGCAGCCGACGCATCGGCGAGGCGGCAACGAGCCGGCCGAGCTTTACAACGTTGATCGCGTCTCG
CGCTCAGAAGGACTGGACCAGCTTCCCACCGACTACTCCAAGCTACCGCCCAAGGTGCCAGAGTTGGGGCCGCCGTTGCC
CGGCGACCTGGGGCCAGCCATCGTGAAGTCTCAGCAGCAAGCGGTGGCCCGCTACTCGCCGCCCGGCCAAGACCCCGGCG
CCGCCGAGCGTGACGCGCGGCGCAAGGAGGCTGAAGCGGCAGCGGGATCGTCAGTGTTTTTCCGCTCCAGCAACCAGCGC
GCCGCTACCGCGCCGGCGCAGGTGGCCGCTGCTGGCCCAGCTTCTGGCTTGGCGGGCTTCGATCCGCAGGCCGCTGGGCC
GGCCTCGACGGCGGCCCAGCCCGCCGACCCGACCGCCGTGCAGAACCGGCAAGACCAGAAGGAGGCGTTCCAGAAAGCCG
GAACTACGGAAACCCGTAATTCCGGCAATCTGCAAATGCCGACTTCGCCGTATCAAGTGATGGCTGGCACGGTAATCTCG
GCAGCACTCGTCACGGGCATCAAGTCCGACCTGCCGGGTAATGTGATCGGCACGGTGACGGAGCCGGTGTACGACACCGC
GACCGGCCGATACCTGCTGATCCCGCAGGGATCGCGCATCTTCGGCAAATACAACAGCCAGGTCGCTTATGGGCAGAGCC
GGGTACAGGTGGTGTGGAACCGGGTCATCCTGCCGGACACGTCATCGCTCACACTCGACAACCTGGCCGGCACCGATCCG
GCCGGCTATGCCGGCCTGGAGGATGGCGTTGATTGGCATTGGGATCGCATCTTTGCTGGCGCGGCACTGACGACGGTGCT
GGGCGTCGGTGCCGAACTGGCCGCGCCGGAGAACCGGCAGGGCGGCGATCGCGTCATCATTGCCGGGCGCGACAGCTTGC
AAGACAGTGTGAACCAGGCAGGACAGGAGATGACTCGGCGCAACCTCAACATCCAGCCGACGCTGACAGAGCGGCCGGGC
CTGCCGGTCAGCATCATCGTCAACCGCGACCTCGTGCTGCGGCCCTACCAGCCGCTGTTCTTCAATCGGGGGACTTCGCA
ATGA

Upstream 100 bases:

>100_bases
TCGTGGATCGGCTGTTCGGCGCGGCCGAACTTCGCCTGGGCGGGGACAAGGGCGACGTGGTGCGCATCGAGCGCACGGAT
GGCACGCGGGGGAAATGACC

Downstream 100 bases:

>100_bases
GTACGACGCGCAAGCTGCGACTCGGGCCGCTGCCCAAAACCGAAAGCGTCAAGCTGACCTTCGCGTGTCCTGCCGCTTTA
AAGGCCGATCTGGACCGTTA

Product: conjugation trbi family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSQDETPDVPIPDAAPKVAPENVALRAQPRPVTRLNRRTLALLTGGLGVAVLGATMWSLQPTHRRGGNEPAELYNVDRVS
RSEGLDQLPTDYSKLPPKVPELGPPLPGDLGPAIVKSQQQAVARYSPPGQDPGAAERDARRKEAEAAAGSSVFFRSSNQR
AATAPAQVAAAGPASGLAGFDPQAAGPASTAAQPADPTAVQNRQDQKEAFQKAGTTETRNSGNLQMPTSPYQVMAGTVIS
AALVTGIKSDLPGNVIGTVTEPVYDTATGRYLLIPQGSRIFGKYNSQVAYGQSRVQVVWNRVILPDTSSLTLDNLAGTDP
AGYAGLEDGVDWHWDRIFAGAALTTVLGVGAELAAPENRQGGDRVIIAGRDSLQDSVNQAGQEMTRRNLNIQPTLTERPG
LPVSIIVNRDLVLRPYQPLFFNRGTSQ

Sequences:

>Translated_427_residues
MSQDETPDVPIPDAAPKVAPENVALRAQPRPVTRLNRRTLALLTGGLGVAVLGATMWSLQPTHRRGGNEPAELYNVDRVS
RSEGLDQLPTDYSKLPPKVPELGPPLPGDLGPAIVKSQQQAVARYSPPGQDPGAAERDARRKEAEAAAGSSVFFRSSNQR
AATAPAQVAAAGPASGLAGFDPQAAGPASTAAQPADPTAVQNRQDQKEAFQKAGTTETRNSGNLQMPTSPYQVMAGTVIS
AALVTGIKSDLPGNVIGTVTEPVYDTATGRYLLIPQGSRIFGKYNSQVAYGQSRVQVVWNRVILPDTSSLTLDNLAGTDP
AGYAGLEDGVDWHWDRIFAGAALTTVLGVGAELAAPENRQGGDRVIIAGRDSLQDSVNQAGQEMTRRNLNIQPTLTERPG
LPVSIIVNRDLVLRPYQPLFFNRGTSQ
>Mature_426_residues
SQDETPDVPIPDAAPKVAPENVALRAQPRPVTRLNRRTLALLTGGLGVAVLGATMWSLQPTHRRGGNEPAELYNVDRVSR
SEGLDQLPTDYSKLPPKVPELGPPLPGDLGPAIVKSQQQAVARYSPPGQDPGAAERDARRKEAEAAAGSSVFFRSSNQRA
ATAPAQVAAAGPASGLAGFDPQAAGPASTAAQPADPTAVQNRQDQKEAFQKAGTTETRNSGNLQMPTSPYQVMAGTVISA
ALVTGIKSDLPGNVIGTVTEPVYDTATGRYLLIPQGSRIFGKYNSQVAYGQSRVQVVWNRVILPDTSSLTLDNLAGTDPA
GYAGLEDGVDWHWDRIFAGAALTTVLGVGAELAAPENRQGGDRVIIAGRDSLQDSVNQAGQEMTRRNLNIQPTLTERPGL
PVSIIVNRDLVLRPYQPLFFNRGTSQ

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 45187; Mature: 45056

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDETPDVPIPDAAPKVAPENVALRAQPRPVTRLNRRTLALLTGGLGVAVLGATMWSLQ
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCEEEEEECCHHHHHHHHHHHHCC
PTHRRGGNEPAELYNVDRVSRSEGLDQLPTDYSKLPPKVPELGPPLPGDLGPAIVKSQQQ
CHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
AVARYSPPGQDPGAAERDARRKEAEAAAGSSVFFRSSNQRAATAPAQVAAAGPASGLAGF
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCC
DPQAAGPASTAAQPADPTAVQNRQDQKEAFQKAGTTETRNSGNLQMPTSPYQVMAGTVIS
CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHH
AALVTGIKSDLPGNVIGTVTEPVYDTATGRYLLIPQGSRIFGKYNSQVAYGQSRVQVVWN
HHHHHHHHHCCCCCEEECCCCCHHHCCCCCEEEEECCCEEEECCCCEEECCCHHHEEHHH
RVILPDTSSLTLDNLAGTDPAGYAGLEDGVDWHWDRIFAGAALTTVLGVGAELAAPENRQ
EEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCC
GGDRVIIAGRDSLQDSVNQAGQEMTRRNLNIQPTLTERPGLPVSIIVNRDLVLRPYQPLF
CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHE
FNRGTSQ
ECCCCCC
>Mature Secondary Structure 
SQDETPDVPIPDAAPKVAPENVALRAQPRPVTRLNRRTLALLTGGLGVAVLGATMWSLQ
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCEEEEEECCHHHHHHHHHHHHCC
PTHRRGGNEPAELYNVDRVSRSEGLDQLPTDYSKLPPKVPELGPPLPGDLGPAIVKSQQQ
CHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
AVARYSPPGQDPGAAERDARRKEAEAAAGSSVFFRSSNQRAATAPAQVAAAGPASGLAGF
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCC
DPQAAGPASTAAQPADPTAVQNRQDQKEAFQKAGTTETRNSGNLQMPTSPYQVMAGTVIS
CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHH
AALVTGIKSDLPGNVIGTVTEPVYDTATGRYLLIPQGSRIFGKYNSQVAYGQSRVQVVWN
HHHHHHHHHCCCCCEEECCCCCHHHCCCCCEEEEECCCEEEECCCCEEECCCHHHEEHHH
RVILPDTSSLTLDNLAGTDPAGYAGLEDGVDWHWDRIFAGAALTTVLGVGAELAAPENRQ
EEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCC
GGDRVIIAGRDSLQDSVNQAGQEMTRRNLNIQPTLTERPGLPVSIIVNRDLVLRPYQPLF
CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHE
FNRGTSQ
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]