Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222110521

Identifier: 222110521

GI number: 222110521

Start: 1380761

End: 1381501

Strand: Direct

Name: 222110521

Synonym: Dtpsy_1320

Alternate gene names: NA

Gene position: 1380761-1381501 (Clockwise)

Preceding gene: 222110520

Following gene: 222110522

Centisome position: 36.37

GC content: 65.32

Gene sequence:

>741_bases
ATGAAGACCCATGCGCTTTCCATTTCGCTCGCCGCCGCGTTGTCGCTCTCGCTGTTGACCTCGTCACCAGCGTTGGCCTG
GCGCATCGTCTTTGATCCGACCAACTATGTGCAGAACACGCTGACCGCGATCCGCACGCTGGAGCAGATCAACAACCAGA
TTCGCCAGCTCCAGAACGAGGCGCAGATGCTGATGAATCAGGCGCGCAACCTCGCCAGCCTGCCGTCCAGCGTGGTCGGC
CAGTTGCGCGCCAATCTGGCGACGACCGAGCGGCTGATCGCCCAGGCCAGGGGCTTGGCCTACGACGTAACGAACCTGGA
TCGGGAGTTCCAGCGCCTGTATCCGGAGCAGTACGCCGCCACCGTGACCGGCGACCAGATGGTCCGCGATGCGCAGGAGC
GTTGGAAGAACACGCTCAACGGCTTGCAGACCACCATGCAGATGCAGGCCCAGGTGTCGCAGAACCTGGGGGAAGACGAA
AGCGTGCTGGCCGACCTCGTGGGCAGGAGCCAGTCGGCCGAAGGCGCGCTGCAGGCGATGCAGGCCATGAACCAGTTGCT
GGCCTTGCAGGCCAAGCAGTCGATCCAGTCGCAGCGGCTCCAGATCACGCAAGACCGGGCCGCTTCGCTGGAACTGGCGC
GGCAGGCGGCAGCCACCGAGCGCGCCCGCGAGGTACGCCGGCGTTTCATGGGCGACGGCACCCCGTACACGCCGCAGCGC
GTGGATTTCTACGGCGACTGA

Upstream 100 bases:

>100_bases
GCCATCGCAGGCTCGATTGGGCGGCCGACCTGCTGCCCTCACTCCCCGGACTTGCGCCGGGTTCCTCTCGTACCGCTGAC
CACCCACAGGAGAACCAGCC

Downstream 100 bases:

>100_bases
CGGGAGGCCGCCATGCGATGCGTCCTCGCCCCGTCTGTTGTGGTGCTTGCTGCGCTGCTGGCCGCCTGCGGCGAGCAGCC
GGCCGACAACCTTGCCGATG

Product: conjugal transfer protein Trbj

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKTHALSISLAAALSLSLLTSSPALAWRIVFDPTNYVQNTLTAIRTLEQINNQIRQLQNEAQMLMNQARNLASLPSSVVG
QLRANLATTERLIAQARGLAYDVTNLDREFQRLYPEQYAATVTGDQMVRDAQERWKNTLNGLQTTMQMQAQVSQNLGEDE
SVLADLVGRSQSAEGALQAMQAMNQLLALQAKQSIQSQRLQITQDRAASLELARQAAATERAREVRRRFMGDGTPYTPQR
VDFYGD

Sequences:

>Translated_246_residues
MKTHALSISLAAALSLSLLTSSPALAWRIVFDPTNYVQNTLTAIRTLEQINNQIRQLQNEAQMLMNQARNLASLPSSVVG
QLRANLATTERLIAQARGLAYDVTNLDREFQRLYPEQYAATVTGDQMVRDAQERWKNTLNGLQTTMQMQAQVSQNLGEDE
SVLADLVGRSQSAEGALQAMQAMNQLLALQAKQSIQSQRLQITQDRAASLELARQAAATERAREVRRRFMGDGTPYTPQR
VDFYGD
>Mature_246_residues
MKTHALSISLAAALSLSLLTSSPALAWRIVFDPTNYVQNTLTAIRTLEQINNQIRQLQNEAQMLMNQARNLASLPSSVVG
QLRANLATTERLIAQARGLAYDVTNLDREFQRLYPEQYAATVTGDQMVRDAQERWKNTLNGLQTTMQMQAQVSQNLGEDE
SVLADLVGRSQSAEGALQAMQAMNQLLALQAKQSIQSQRLQITQDRAASLELARQAAATERAREVRRRFMGDGTPYTPQR
VDFYGD

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27398; Mature: 27398

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHALSISLAAALSLSLLTSSPALAWRIVFDPTNYVQNTLTAIRTLEQINNQIRQLQNE
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMLMNQARNLASLPSSVVGQLRANLATTERLIAQARGLAYDVTNLDREFQRLYPEQYAA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHH
TVTGDQMVRDAQERWKNTLNGLQTTMQMQAQVSQNLGEDESVLADLVGRSQSAEGALQAM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
QAMNQLLALQAKQSIQSQRLQITQDRAASLELARQAAATERAREVRRRFMGDGTPYTPQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VDFYGD
CCCCCC
>Mature Secondary Structure
MKTHALSISLAAALSLSLLTSSPALAWRIVFDPTNYVQNTLTAIRTLEQINNQIRQLQNE
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMLMNQARNLASLPSSVVGQLRANLATTERLIAQARGLAYDVTNLDREFQRLYPEQYAA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHH
TVTGDQMVRDAQERWKNTLNGLQTTMQMQAQVSQNLGEDESVLADLVGRSQSAEGALQAM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
QAMNQLLALQAKQSIQSQRLQITQDRAASLELARQAAATERAREVRRRFMGDGTPYTPQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VDFYGD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA