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The map label for this gene is 222110489

Identifier: 222110489

GI number: 222110489

Start: 1345559

End: 1346416

Strand: Direct

Name: 222110489

Synonym: Dtpsy_1288

Alternate gene names: NA

Gene position: 1345559-1346416 (Clockwise)

Preceding gene: 222110488

Following gene: 222110490

Centisome position: 35.44

GC content: 67.02

Gene sequence:

>858_bases
ATGTCCAGCACCGCGCTGCCGTCCCGGCAGCGGCCGTTGCAGGAGCGCGAACAGCTCGATTTGTTCCGCGCCTTGCCCGG
CGACATGGCGCCGCGCGACAGCCAAGACTTGATGGCCTATCCGTTCTTCTCGCTCGGCAAGTCCAAGCGGGTCAAGCCCA
TCGACTTCCGTGCGGGCAACGTGACGATTCGCGTGGAAGGCACGCAGGAGCACGGCATCGCCACGATTTGGGATGCGGAC
GTGCTGATATGGGCGGCTTCGCAGATCGTGGAGGCGAAGGACGCGGGCTTGCGCCCGTCGCGGCTGATGCGCGCCACGCC
CTACGAGATCCTGCGCTTCATCGGGCGCGGCAAGTCGCTGCGCGACTACCAGCGCCTCAAGGCCGCGCTCGACCGGCTGC
AATCGACCACGGTGGCCACGTCCATCCGCGAGACGACCGGACGGCGCCTGCACCGTTTCTCGTGGATCAACGAATGGAAG
GAGCTGGCCGATGCCAGCGGTATGCCGCTGGGCATCGAGCTGATCCTGCCGGACTGGTTCTATGCGGGCGTGCTCGACGC
CGCCCTGGTGCTGACCATCGACCCGGCGTACTTCCGGCTCACGGGCGGCATCGAACGGTGGCTGTACCGCCTGGTGCGCA
AGCACGGCGGCAAGCAGGCATACGGCTGGCAGTTCGACTTCCGCTACCTGCACCAGAAGTCCGGCAGCACCGCGAAGCCC
TACGACTTCGCCTGCGACCTGCGTGCGCTCGTCGCGCGGCAGTCGCTGCCCGGCTACGTCCTGGGCATCGAGCGGATGCC
GGACAACGGCATGGAACTGCTGACGTTCCGGCCCGTGCTGTATACGGCACGGGGATAA

Upstream 100 bases:

>100_bases
CCGACCGCAGTTTCGAGACGACTTCCGATCCCGAATACGCCGAGCACCACTCGGCCGACAGCCGTGACCGCTGATCGGCG
GCGCGCGGCAGGCCACCGCC

Downstream 100 bases:

>100_bases
CTCCGGGAGAGCCTGTGGATGGAGTCGTGCTATCAGGCGTGCGGGGTATCGTGCTATCAGGCGTGGGACTATCGTGCTAT
CAGGCGTGCCGATCGACCGC

Product: replication initiator and transcription repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSSTALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGNVTIRVEGTQEHGIATIWDAD
VLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWK
ELADASGMPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVLYTARG

Sequences:

>Translated_285_residues
MSSTALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGNVTIRVEGTQEHGIATIWDAD
VLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWK
ELADASGMPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVLYTARG
>Mature_284_residues
SSTALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGNVTIRVEGTQEHGIATIWDADV
LIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKE
LADASGMPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKPY
DFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVLYTARG

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 32454; Mature: 32323

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGN
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCCCCCCCCEEEECCE
VTIRVEGTQEHGIATIWDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSL
EEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCH
RDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKELADASGMPLGIELILPDWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHH
YAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
HHHHHHHEEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCC
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVLYTARG
CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCEEEECCC
>Mature Secondary Structure 
SSTALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCCCCCCCCEEEECCE
VTIRVEGTQEHGIATIWDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSL
EEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCH
RDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKELADASGMPLGIELILPDWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHH
YAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGSTAKP
HHHHHHHEEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCC
YDFACDLRALVARQSLPGYVLGIERMPDNGMELLTFRPVLYTARG
CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]