| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110420
Identifier: 222110420
GI number: 222110420
Start: 1279186
End: 1280196
Strand: Direct
Name: 222110420
Synonym: Dtpsy_1217
Alternate gene names: NA
Gene position: 1279186-1280196 (Clockwise)
Preceding gene: 222110419
Following gene: 222110421
Centisome position: 33.69
GC content: 70.52
Gene sequence:
>1011_bases ATGACCGATCCGCAACGTCCCCAACCCCCGCTGTCCGAACCGCCCGCGAACGCGCCGGTCGAGTTGCTGCGGCCCGTGGC CCATCTGGAGCGCAAGGCCGCGGCGCTGCTGCTGTTCACGCTGGTGCTCGTGCTGGGTGCCGGCCTGTACCTGCTGTACG CGCGCGGCGCGTTCGAGCCCACGCAGCGGCTGGTGCTCACGGCCGAAGATTCCGAGGGCGTGGTCGTGGGTATGGACATG ACGTTCTCGGGCTTTCCCATCGGCCGAGTGCGGCGCATCGAACTGGCCGAGACCGGCAACGTGCGCATCCTCATCGACGT GGCCCAGCGCGACGCGCACTGGCTGCGCACCTCCAGCGTGTTCACCCTGGTCAGCGGGCTGGTGGGCGGCACCACCATCA AGGCCTACAGCGGCATGCTGGCCGACCCGCCGCTGGAGGACGGCGCCGAGCGCCCCGTTCTGCGCGGCGACGCCACGGCG GAGATTCCGCAGCTCATGTCATCGGCACGCCAGCTGCTGGACAACCTGAACGCCATGACCGGCGCAGAGTCCGCCCTGGG CGGCGCCATGGCCCAGGTGCGCACGCTCACCGAGCGGCTCAACGCGCCTGGCGGCGCCCTGGGCGTGCTCATGGGCAACG AGACGGACGCGAAGAAGATCCTCACCACGCTGGAGCGCACCAACCAGTTGCTCGCGCGCATCGACGGCATGGCCGCCAAG GCGGACAGGCAGGTCTTCGGTGCGGGGGGCGACCCCGGGCTGGTGCCCGAGGTGCGGGCCGCCGTGGTGCAGCTCAACGG TTTGCTGGCCGACGCGCGCCAGAGCCTCACCAAGGTGGACGCCGTGCTGGCCGAGGCCCAGGCCGTGGGCGCCAACGCGC GCGAGGCCACGACCGACCTGGGCGCATTGCGCGCCGAGGTGGAAGGCAGCCTGCGCAAGGTGGATGCCTTGGTGAACGAG ATCAACCGCAAGTGGCCCTTTGCCCGCGAAACGGAGCTGAAACTGCCATGA
Upstream 100 bases:
>100_bases CGACTCGGAGCTGGGCGGCTTGGCGCGCATGTTCGCCGTGCTGCTGCTCATCGAGGTGATCTCGCTGATGGGCAATTACT ACTGATTTCATGGCCACGCG
Downstream 100 bases:
>100_bases CCTCCCTGCAGCTTCTCTTGTGGCGGGGCTTGGCACCCGCGCTGGCCGTGGTGCTGTCGGCCTGCGCCGGCAAGGCGCCG GTGCCCGACTGGCAGATGAA
Product: mammalian cell entry related domain-containing protein
Products: NA
Alternate protein names: Mammalian Cell Entry Related Domain Protein; Mammalian Cell Entry Related Protein
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTDPQRPQPPLSEPPANAPVELLRPVAHLERKAAALLLFTLVLVLGAGLYLLYARGAFEPTQRLVLTAEDSEGVVVGMDM TFSGFPIGRVRRIELAETGNVRILIDVAQRDAHWLRTSSVFTLVSGLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATA EIPQLMSSARQLLDNLNAMTGAESALGGAMAQVRTLTERLNAPGGALGVLMGNETDAKKILTTLERTNQLLARIDGMAAK ADRQVFGAGGDPGLVPEVRAAVVQLNGLLADARQSLTKVDAVLAEAQAVGANAREATTDLGALRAEVEGSLRKVDALVNE INRKWPFARETELKLP
Sequences:
>Translated_336_residues MTDPQRPQPPLSEPPANAPVELLRPVAHLERKAAALLLFTLVLVLGAGLYLLYARGAFEPTQRLVLTAEDSEGVVVGMDM TFSGFPIGRVRRIELAETGNVRILIDVAQRDAHWLRTSSVFTLVSGLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATA EIPQLMSSARQLLDNLNAMTGAESALGGAMAQVRTLTERLNAPGGALGVLMGNETDAKKILTTLERTNQLLARIDGMAAK ADRQVFGAGGDPGLVPEVRAAVVQLNGLLADARQSLTKVDAVLAEAQAVGANAREATTDLGALRAEVEGSLRKVDALVNE INRKWPFARETELKLP >Mature_335_residues TDPQRPQPPLSEPPANAPVELLRPVAHLERKAAALLLFTLVLVLGAGLYLLYARGAFEPTQRLVLTAEDSEGVVVGMDMT FSGFPIGRVRRIELAETGNVRILIDVAQRDAHWLRTSSVFTLVSGLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATAE IPQLMSSARQLLDNLNAMTGAESALGGAMAQVRTLTERLNAPGGALGVLMGNETDAKKILTTLERTNQLLARIDGMAAKA DRQVFGAGGDPGLVPEVRAAVVQLNGLLADARQSLTKVDAVLAEAQAVGANAREATTDLGALRAEVEGSLRKVDALVNEI NRKWPFARETELKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35692; Mature: 35560
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPQRPQPPLSEPPANAPVELLRPVAHLERKAAALLLFTLVLVLGAGLYLLYARGAFEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC TQRLVLTAEDSEGVVVGMDMTFSGFPIGRVRRIELAETGNVRILIDVAQRDAHWLRTSSV CCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHH FTLVSGLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATAEIPQLMSSARQLLDNLNAMT HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GAESALGGAMAQVRTLTERLNAPGGALGVLMGNETDAKKILTTLERTNQLLARIDGMAAK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADRQVFGAGGDPGLVPEVRAAVVQLNGLLADARQSLTKVDAVLAEAQAVGANAREATTDL CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GALRAEVEGSLRKVDALVNEINRKWPFARETELKLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TDPQRPQPPLSEPPANAPVELLRPVAHLERKAAALLLFTLVLVLGAGLYLLYARGAFEP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC TQRLVLTAEDSEGVVVGMDMTFSGFPIGRVRRIELAETGNVRILIDVAQRDAHWLRTSSV CCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHH FTLVSGLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATAEIPQLMSSARQLLDNLNAMT HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GAESALGGAMAQVRTLTERLNAPGGALGVLMGNETDAKKILTTLERTNQLLARIDGMAAK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADRQVFGAGGDPGLVPEVRAAVVQLNGLLADARQSLTKVDAVLAEAQAVGANAREATTDL CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GALRAEVEGSLRKVDALVNEINRKWPFARETELKLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA