Click here to switch to the map view.

The map label for this gene is 222110319

Identifier: 222110319

GI number: 222110319

Start: 1159323

End: 1160321

Strand: Direct

Name: 222110319

Synonym: Dtpsy_1106

Alternate gene names: NA

Gene position: 1159323-1160321 (Clockwise)

Preceding gene: 222110318

Following gene: 222110320

Centisome position: 30.54

GC content: 65.37

Gene sequence:

>999_bases
ATGTCAGGGCTGACCTATTTATTCGATACCGCGCAGCAATGGCTGTTCGAGACGCTGGTACAGCCCGCGCTCTTCATGCT
GGGCCAGGCCAATGTGCTGGAGGACGGTTATGCCGCCACCGGATGGCTGCTGGTGGGACTGCTGCAACTGGGGGTGATGG
TCGCGGTGATCGGGCCTTTGGAGCGCTGGCGCCCGGTGGAGCCGTTGCGCGACCGTGGTGCCGTGCACGTGGACATGCTT
TACACGCTGATCCATCGCCTGGGTCTTTTTCGCCTGGCACTGTTCTTCACCACGGAGCCTCTGTGGAATGCACTGTTTGG
CGCCCTGCGCGCCCATGGCTGGAAGACCCTGCAGCTGGATGCGCTCTGGCCGGGTGTCTCCGACTTGCCCGTCGTGAGCC
TGCTGCTGTACCTGCTGGTGTTCGACTTCGTGGACTATGGGATCCACCGCGGCCAGCACCGCTTTGAATGGTGGTGGAGG
CTGCATGCGCTCCACCATTCGCAGCGACAGATGACGATGTGGAGCGACAACCGCAACCATCTGCTGGACGATCTGCTGCG
CGATGCCATCATCGTGTTCGTCGCGCAGTGCATTGGTGTGGCGCCGGGGCAGTTTGTCGCCATCGTGGCCCTCACGCAGC
TCAGCGAGAACCTGCACCACGCCAACCTGCGCCTGTGGTTCGGCCAGGTGGGCGAGCGCCTGTGGGTCAGCCCGCGTTTC
CACCGCATGCACCACGCCATGGGCCTGGGCCCTGAAGCTACACCTGGGCAGGGAACCCATCAGCACCCGCATGCGGCAGT
GCCGGGGGGCAACAACTTCGGCGTGTTGTTGCCGTGGTGGGACATGTTGTTCGGTACGGCCAACTTCGAGCACCGCTACG
AGCCCACGGGCGTGCGCGACCAGGTGGAGGCGGACGCGGACGGCCGCGTGCGTGATTACGGGCGGGGGTTCTGGGCGCAG
CAGTGGCGCGGCCTGCTGCGGCTGGTGGGGCGGGCGTAG

Upstream 100 bases:

>100_bases
GCACGCTGCGCGAGCATCCTGTGTACGGAGCACAAGCGCAGAGAAAATGACACAACGCCCGGCTATGCTGCCGCGCACCC
ACGCAACGCCACGGTGACTC

Downstream 100 bases:

>100_bases
AGAGCCGATCGCGCTATGCTCGCGCGCATGGGGCTTTTCATCGATTCCTTCTGGCGCGCAGTGGGCTATTGCCTGATGCC
GCGCATCATTGCGCTGTCGC

Product: fatty acid hydroxylase

Products: NA

Alternate protein names: Transmembrane Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSGLTYLFDTAQQWLFETLVQPALFMLGQANVLEDGYAATGWLLVGLLQLGVMVAVIGPLERWRPVEPLRDRGAVHVDML
YTLIHRLGLFRLALFFTTEPLWNALFGALRAHGWKTLQLDALWPGVSDLPVVSLLLYLLVFDFVDYGIHRGQHRFEWWWR
LHALHHSQRQMTMWSDNRNHLLDDLLRDAIIVFVAQCIGVAPGQFVAIVALTQLSENLHHANLRLWFGQVGERLWVSPRF
HRMHHAMGLGPEATPGQGTHQHPHAAVPGGNNFGVLLPWWDMLFGTANFEHRYEPTGVRDQVEADADGRVRDYGRGFWAQ
QWRGLLRLVGRA

Sequences:

>Translated_332_residues
MSGLTYLFDTAQQWLFETLVQPALFMLGQANVLEDGYAATGWLLVGLLQLGVMVAVIGPLERWRPVEPLRDRGAVHVDML
YTLIHRLGLFRLALFFTTEPLWNALFGALRAHGWKTLQLDALWPGVSDLPVVSLLLYLLVFDFVDYGIHRGQHRFEWWWR
LHALHHSQRQMTMWSDNRNHLLDDLLRDAIIVFVAQCIGVAPGQFVAIVALTQLSENLHHANLRLWFGQVGERLWVSPRF
HRMHHAMGLGPEATPGQGTHQHPHAAVPGGNNFGVLLPWWDMLFGTANFEHRYEPTGVRDQVEADADGRVRDYGRGFWAQ
QWRGLLRLVGRA
>Mature_331_residues
SGLTYLFDTAQQWLFETLVQPALFMLGQANVLEDGYAATGWLLVGLLQLGVMVAVIGPLERWRPVEPLRDRGAVHVDMLY
TLIHRLGLFRLALFFTTEPLWNALFGALRAHGWKTLQLDALWPGVSDLPVVSLLLYLLVFDFVDYGIHRGQHRFEWWWRL
HALHHSQRQMTMWSDNRNHLLDDLLRDAIIVFVAQCIGVAPGQFVAIVALTQLSENLHHANLRLWFGQVGERLWVSPRFH
RMHHAMGLGPEATPGQGTHQHPHAAVPGGNNFGVLLPWWDMLFGTANFEHRYEPTGVRDQVEADADGRVRDYGRGFWAQQ
WRGLLRLVGRA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37951; Mature: 37820

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLTYLFDTAQQWLFETLVQPALFMLGQANVLEDGYAATGWLLVGLLQLGVMVAVIGPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCH
ERWRPVEPLRDRGAVHVDMLYTLIHRLGLFRLALFFTTEPLWNALFGALRAHGWKTLQLD
HHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEE
ALWPGVSDLPVVSLLLYLLVFDFVDYGIHRGQHRFEWWWRLHALHHSQRQMTMWSDNRNH
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLDDLLRDAIIVFVAQCIGVAPGQFVAIVALTQLSENLHHANLRLWFGQVGERLWVSPRF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHCHHHCCCHHH
HRMHHAMGLGPEATPGQGTHQHPHAAVPGGNNFGVLLPWWDMLFGTANFEHRYEPTGVRD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCH
QVEADADGRVRDYGRGFWAQQWRGLLRLVGRA
HHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGLTYLFDTAQQWLFETLVQPALFMLGQANVLEDGYAATGWLLVGLLQLGVMVAVIGPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCH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HHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA